psolymos/opticut: Likelihood Based Optimal Partitioning and Indicator Species Analysis
Likelihood based optimal partitioning and indicator species analysis. Finding the best binary partition for each species based on model selection, with the possibility to take into account modifying/confounding variables as described in Kemencei et al. (2014) <doi:10.1556/ComEc.15.2014.2.6>. The package implements binary and multi-level response models, various measures of uncertainty, Lorenz-curve based thresholding, with native support for parallel computations.
Getting started
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Package details |
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| Author | Peter Solymos [cre, aut], Ermias T. Azeria [ctb] |
| Maintainer | Peter Solymos <solymos@ualberta.ca> |
| License | GPL-2 |
| Version | 0.1-2 |
| URL | https://github.com/psolymos/opticut |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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