Man pages for raim/segmenTier
Segmentation of Clustered Sequences

ashasinh data transformation
backtraceBack-tracing step of the 'segmenTier' algorithm.
calculateScoredynamic programming routine
clusterCor_cCalculates data-cluster similarity.
clusterMaxCor_cReports the maximally correlating cluster for each data...
clusterTimeseriesCluster a processed time-series with k-means.
colorClustersAssign colors to clusters.
flowclusterTimeseriesCluster a processed time-series with 'flowClust' &...
log_1log trafo handling zeros by adding 1
logLik.kmeansAIC/BIC for kmeans
myPearsonPearson product-moment correlation coefficient
plot.clusteringPlot method for the "clustering" object.
plotdevSwitch between plot devices.
plotSegmentationSummary plot for the 'segmenTier' pipeline.
plot.segmentsPlot method for the "segments" object.
plot.timeseriesPlot method for the "timeseries" object.
processTimeseriesProcess a time-series for 'segmenTier'.
segmentCluster.batchBatch wrapper for 'segmentClusters'.
segmentClustersRun the 'segmenTier' algorithm.
segmenTiersegmenTier : cluster-based segmentation from a sequential...
setVarySettingsParameters for 'segmentCluster.batch'.
sortClustersSort clusters by similarity.
tsdTranscriptome time-series from budding yeast.
raim/segmenTier documentation built on Jan. 21, 2018, 8:53 p.m.