richelbilderbeek/babette: Control BEAST2 from R

'BEAST2' (<http://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAST2' is commonly accompanied by 'BEAUti 2' (<http://www.beast2.org>), 'Tracer' <http://tree.bio.ed.ac.uk/software/tracer/> and DensiTree (<http://www.beast2.org>). 'babette' provides for an alternative workflow of using all these tools separately. This allows doing complex Bayesian phylogenetics easily and reproducibly from R.

Getting started

Package details

MaintainerRichel J.C. Bilderbeek <[email protected]>
LicenseGPL-3 | file LICENSE
Version1.3
URL https://github.com/richelbilderbeek/babette
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("richelbilderbeek/babette")
richelbilderbeek/babette documentation built on Nov. 10, 2018, 4:29 p.m.