calc_growth_rates | Calculate the growth rates of all species |
calc_resource_changes | Calculate the change in resource, equation 2 |
calc_specific_growth_rate | Calculate the specific growth rates, equation 3 |
create_hsrs | Create the matrix of half-saturation constants of species... |
create_hsrs_1_a | Create the matrix of half-saturation constants of 3 species... |
create_hsrs_1_c | Create the matrix of half-saturation constants of 6 species... |
create_hsrs_1_d | Create the matrix of half-saturation constants of 6 species... |
create_init_spec_densities | Create the initial species densities for the species present... |
create_srcs | Create the matrix of species' (rows) resource (columns)... |
create_srcs_1_a | Create the species resource contents used in figure 1 A. |
create_srcs_1_c | Create the species resource contents used in figure 1 C. |
create_srcs_1_d | Create the species resource contents used in figure 1 D. |
create_uptake_matrix | Create the uptake matrix, the right-hand part of equation 2 |
default_params_doc | This function does nothing. It is intended to inherit is... |
get_max_growth_rates | Get the maximum growth rates of a number of species |
get_mortality_rates | Get the mortality rates for any number of species |
get_supply_rates | Get the default supply rates |
get_turnover_rate | Get the system's turnover rate |
run_sim | Run the simulation |
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