Files in road2stat/hdnom
Benchmarking and Visualization Toolkit for Penalized Cox Models
.Rbuildignore
.gitattributes
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
.lintr
CODE_OF_CONDUCT.md
CONTRIBUTING.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/1_1_model.R
R/1_2_model_tune.R
R/1_3_model_method.R
R/2_1_nomogram.R
R/2_2_convert_model.R
R/2_3_survial_curves.R
R/2_4_nomogram_method.R
R/3_1_validate.R
R/3_2_validate_utils.R
R/3_3_validate_method.R
R/3_4_validate_external.R
R/3_5_validate_external_utils.R
R/3_6_validate_external_method.R
R/4_1_calibrate.R
R/4_2_calibrate_utils.R
R/4_3_calibrate_method.R
R/4_4_calibrate_external.R
R/4_5_calibrate_external_utils.R
R/4_6_calibrate_external_method.R
R/4_7_kmplot.R
R/4_8_logrank_test.R
R/5_1_compare_by_validate.R
R/5_2_compare_by_validate_method.R
R/5_3_compare_by_calibrate.R
R/5_4_compare_by_calibrate_method.R
R/datalist.R
R/hdnom.R
R/palettes.R
R/rms_nomogram.R
R/rms_nomogram_method.R
R/rms_nomogram_misc.R
R/survAUC_ChamDiao.R
R/survAUC_Song_Zhou.R
R/survAUC_Uno.R
R/survAUC_utils.R
R/theme_hdnom.R
README.Rmd
README.md
_pkgdown.yml
data-raw/smart.R
data/smart.rda
data/smarto.rda
hdnom.Rproj
inst/AUTHORS
inst/CITATION
inst/logo/logo.R
man/as_nomogram.Rd
man/calibrate.Rd
man/calibrate_external.Rd
man/calibrate_external_surv_prob_true.Rd
man/calibrate_surv_prob_true.Rd
man/compare_by_calibrate.Rd
man/compare_by_validate.Rd
man/figures/README-kmplot-1.png
man/figures/README-model-comparison-1.png
man/figures/README-model-validation-calibration-1.png
man/figures/README-nomogram-1.png
man/figures/logo.png
man/fit_aenet.Rd
man/fit_alasso.Rd
man/fit_enet.Rd
man/fit_flasso.Rd
man/fit_lasso.Rd
man/fit_mcp.Rd
man/fit_mnet.Rd
man/fit_scad.Rd
man/fit_snet.Rd
man/glmnet_basesurv.Rd
man/glmnet_calibrate_external_surv_prob_pred.Rd
man/glmnet_calibrate_surv_prob_pred.Rd
man/glmnet_survcurve.Rd
man/glmnet_tune_alpha.Rd
man/glmnet_validate_external_tauc.Rd
man/glmnet_validate_tauc.Rd
man/hdnom-package.Rd
man/infer_variable_type.Rd
man/kmplot.Rd
man/kmplot_raw.Rd
man/logrank_test.Rd
man/ncvreg_basesurv.Rd
man/ncvreg_calibrate_external_surv_prob_pred.Rd
man/ncvreg_calibrate_surv_prob_pred.Rd
man/ncvreg_survcurve.Rd
man/ncvreg_tune_gamma.Rd
man/ncvreg_tune_gamma_alpha.Rd
man/ncvreg_validate_external_tauc.Rd
man/ncvreg_validate_tauc.Rd
man/palette_aaas.Rd
man/palette_jco.Rd
man/palette_lancet.Rd
man/palette_npg.Rd
man/penalized_basesurv.Rd
man/penalized_calibrate_external_surv_prob_pred.Rd
man/penalized_calibrate_surv_prob_pred.Rd
man/penalized_survcurve.Rd
man/penalized_tune_lambda.Rd
man/penalized_validate_external_tauc.Rd
man/penalized_validate_tauc.Rd
man/plot.hdnom.calibrate.Rd
man/plot.hdnom.calibrate.external.Rd
man/plot.hdnom.compare.calibrate.Rd
man/plot.hdnom.compare.validate.Rd
man/plot.hdnom.nomogram.Rd
man/plot.hdnom.validate.Rd
man/plot.hdnom.validate.external.Rd
man/predict.hdnom.model.Rd
man/print.hdnom.calibrate.Rd
man/print.hdnom.calibrate.external.Rd
man/print.hdnom.compare.calibrate.Rd
man/print.hdnom.compare.validate.Rd
man/print.hdnom.model.Rd
man/print.hdnom.nomogram.Rd
man/print.hdnom.validate.Rd
man/print.hdnom.validate.external.Rd
man/smart.Rd
man/smarto.Rd
man/summary.hdnom.calibrate.Rd
man/summary.hdnom.calibrate.external.Rd
man/summary.hdnom.compare.calibrate.Rd
man/summary.hdnom.compare.validate.Rd
man/summary.hdnom.validate.Rd
man/summary.hdnom.validate.external.Rd
man/theme_hdnom.Rd
man/validate.Rd
man/validate_external.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
src/Makevars
src/hdnom-init.c
src/survAUC_Cham_Diao.c
src/survAUC_Cham_Diao.h
src/survAUC_SongZhou.c
src/survAUC_SongZhou.h
src/survAUC_UNO.c
src/survAUC_UNO.h
src/utils.c
src/utils.h
vignettes/custom.css
vignettes/fit.rds
vignettes/hdnom.Rmd
