examples/drop_clstrs.R
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
data("dragonflies")
# specify cids to *keep*
random_cids <- sample(dragonflies@cids, 100)
# drop an entire cluster
nbefore <- length(dragonflies@cids)
dragonflies <- drop_clstrs(phylota = dragonflies, cid = random_cids)
nafter <- length(dragonflies@cids)
# now there are only 100 clusters
(nafter < nbefore)
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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data("dragonflies")
# specify cids to *keep*
random_cids <- sample(dragonflies@cids, 100)
# drop an entire cluster
nbefore <- length(dragonflies@cids)
dragonflies <- drop_clstrs(phylota = dragonflies, cid = random_cids)
nafter <- length(dragonflies@cids)
# now there are only 100 clusters
(nafter < nbefore)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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