API for ropenscilabs/taxa
Taxonomic Classes

Global functions
\%>\% Man page
add_names Source code
all_empty Source code
all_functions Man page Source code
all_names Man page Source code
all_names.Taxmap Source code
all_names.Taxonomy Source code
all_names.default Source code
arrange_obs Man page Source code
arrange_obs.Taxmap Source code
arrange_obs.default Source code
arrange_taxa Man page Source code
arrange_taxa.Taxonomy Source code
arrange_taxa.default Source code
as_id Man page Source code
assert Source code
branches Man page Source code
branches.Taxonomy Source code
branches.default Source code
can_be_used_in_taxmap Man page Source code
check_class_col Man page Source code
check_for_pkg Man page Source code
check_taxmap_data Man page Source code
classifications Man page Source code
classifications.Taxonomy Source code
classifications.default Source code
contains Man page
convert_base Man page Source code
correct_taxon_names Man page Source code
count_capture_groups Man page Source code
csep2vec Source code
ct Source code
data_used Man page
database_list Man page
desc_font Man page Source code
ends_with Man page
error_font Man page Source code
everything Man page
ex_hierarchies Man page
ex_hierarchy1 Man page
ex_hierarchy2 Man page
ex_hierarchy3 Man page
ex_taxmap Man page
ex_taxonomy Man page
extract_tax_data Man page Source code
filter_obs Man page Source code
filter_obs.Taxmap Source code
filter_obs.default Source code
filter_taxa Man page Source code
filter_taxa.Taxmap Source code
filter_taxa.Taxonomy Source code
filter_taxa.default Source code
filtering-helpers Man page
get_data Man page Source code
get_data.Taxonomy Source code
get_data.default Source code
get_data_frame Man page Source code
get_data_frame.Taxonomy Source code
get_data_frame.default Source code
get_database_name Man page Source code
get_dataset Man page Source code
get_dataset.Taxmap Source code
get_dataset.default Source code
get_dots_or_list Man page Source code
get_sort_var Man page Source code
helpers_fxn_se Source code
hierarchies Man page Source code
hierarchy Man page Source code
highlight_taxon_ids Man page Source code
id_classifications Man page Source code
id_classifications.Taxonomy Source code
id_classifications.default Source code
ids Man page Source code
init_taxmap_data Man page Source code
internodes Man page Source code
internodes.Taxonomy Source code
internodes.default Source code
is_branch Man page Source code
is_branch.Taxonomy Source code
is_branch.default Source code
is_internode Man page Source code
is_internode.Taxonomy Source code
is_internode.default Source code
is_leaf Man page Source code
is_leaf.Taxonomy Source code
is_leaf.default Source code
is_root Man page Source code
is_root.Taxonomy Source code
is_root.default Source code
is_stem Man page Source code
is_stem.Taxonomy Source code
is_stem.default Source code
leaves Man page Source code
leaves.Taxonomy Source code
leaves.default Source code
leaves_apply Man page Source code
leaves_apply.Taxonomy Source code
leaves_apply.default Source code
limited_print Man page Source code
lookup_tax_data Man page Source code
map_data Man page Source code
map_data.Taxonomy Source code
map_data.default Source code
map_data_ Man page Source code
map_data_.Taxonomy Source code
map_data_.default Source code
map_unique Man page Source code
matches Man page
multi_sep_split Man page Source code
mutate_obs Man page Source code
mutate_obs.Taxmap Source code
mutate_obs.default Source code
n_leaves Man page Source code
n_leaves.Taxonomy Source code
n_leaves.default Source code
n_leaves_1 Man page Source code
n_leaves_1.Taxonomy Source code
n_leaves_1.default Source code
n_obs Man page Source code
n_obs.Taxmap Source code
n_obs.default Source code
n_obs_1 Man page Source code
n_obs_1.Taxmap Source code
n_obs_1.default Source code
n_subtaxa Man page Source code
n_subtaxa.Taxonomy Source code
n_subtaxa.default Source code
n_subtaxa_1 Man page Source code
n_subtaxa_1.Taxonomy Source code
n_subtaxa_1.default Source code
n_supertaxa Man page Source code
n_supertaxa.Taxonomy Source code
n_supertaxa.default Source code
n_supertaxa_1 Man page Source code
n_supertaxa_1.Taxonomy Source code
n_supertaxa_1.default Source code
name_font Man page Source code
names_used Man page
nms Man page Source code
num_range Man page
obs Man page Source code
obs.Taxmap Source code
obs.default Source code
obs_apply Man page Source code
obs_apply.Taxmap Source code
obs_apply.default Source code
one_of Man page
parse_dataset Man page Source code
parse_edge_list Man page Source code
parse_heirarchies_to_taxonomy Man page Source code
parse_possibly_named_logical Man page Source code
parse_raw_heirarchies_to_taxonomy Man page Source code
parse_tax_data Man page Source code
pick Man page Source code
pick.Hierarchy Source code
pick.default Source code
pick.hierarchies Source code
pop Man page Source code
pop.Hierarchy Source code
pop.default Source code
pop.hierarchies Source code
prefixed_print Man page Source code
print.hierarchies Source code
print.taxa Source code
print.taxapicker Source code
print__character Man page Source code
print__data.frame Man page Source code
print__default_ Man page Source code
print__factor Man page Source code
print__integer Man page Source code
print__list Man page Source code
print__logical Man page Source code
print__matrix Man page Source code
print__numeric Man page Source code
print__ordered Man page Source code
print__tbl_df Man page Source code
print__vector Man page Source code
print_item Man page Source code
print_tree Man page Source code
print_tree.Taxonomy Source code
print_tree.default Source code
progress_lapply Man page Source code
punc_font Man page Source code
ranks Man page Source code
ranks_ref Man page
remove_redundant_names Man page Source code
remove_redundant_names.Taxonomy Source code
remove_redundant_names.default Source code
replace_taxon_ids Man page Source code
replace_taxon_ids.Taxonomy Source code
replace_taxon_ids.default Source code
roots Man page Source code
roots.Taxonomy Source code
roots.default Source code
sample_frac_obs Man page Source code
sample_frac_obs.Taxmap Source code
sample_frac_obs.default Source code
sample_frac_taxa Man page Source code
sample_frac_taxa.Taxmap Source code
sample_frac_taxa.Taxonomy Source code
sample_frac_taxa.default Source code
sample_n_obs Man page Source code
sample_n_obs.Taxmap Source code
sample_n_obs.default Source code
sample_n_taxa Man page Source code
sample_n_taxa.Taxmap Source code
sample_n_taxa.Taxonomy Source code
sample_n_taxa.default Source code
select_obs Man page Source code
select_obs.Taxmap Source code
select_obs.default Source code
simplify Man page Source code
span Man page Source code
span.Hierarchy Source code
span.default Source code
span.hierarchies Source code
starts_with Man page
stems Man page Source code
stems.Taxonomy Source code
stems.default Source code
strex Source code
subtaxa Man page Source code
subtaxa.Taxonomy Source code
subtaxa.default Source code
subtaxa_apply Man page Source code
subtaxa_apply.Taxonomy Source code
subtaxa_apply.default Source code
supertaxa Man page Source code
supertaxa.Taxonomy Source code
supertaxa.default Source code
supertaxa_apply Man page Source code
supertaxa_apply.Taxonomy Source code
supertaxa_apply.default Source code
taxa Man page Source code
taxa-package Man page
taxmap Man page Source code
taxon Man page Source code
taxon_database Man page Source code
taxon_id Man page Source code
taxon_ids Man page Source code
taxon_ids.Taxonomy Source code
taxon_ids.default Source code
taxon_indexes Man page Source code
taxon_indexes.Taxonomy Source code
taxon_indexes.default Source code
taxon_name Man page Source code
taxon_names Man page Source code
taxon_names.Taxonomy Source code
taxon_names.default Source code
taxon_rank Man page Source code
taxon_ranks Man page Source code
taxon_ranks.Taxonomy Source code
taxon_ranks.default Source code
taxonomy Man page Source code
taxonomy_table Man page Source code
taxonomy_table.Taxonomy Source code
taxonomy_table.default Source code
tid_font Man page Source code
to_percent Man page Source code
transmute_obs Man page Source code
transmute_obs.Taxmap Source code
transmute_obs.default Source code
unique_mapping Man page Source code
validate_regex_key_pair Man page Source code
validate_regex_match Man page Source code
validate_taxmap_funcs Man page Source code
which_ranks Source code
ropenscilabs/taxa documentation built on Aug. 30, 2018, 4:39 a.m.