lcalc: calculate L50 (other other slice) for a given vector of...

Description Usage Arguments Value Author(s) References

View source: R/SequenceCharacteristics.R

Description

L50 - number of scaffolds that are longer than, or equal to, the N50 length and therefore include half the bases of the assembly

Usage

1
lcalc(len.vector, n)

Arguments

len.vector

a vector of sequence lengths

n

the value to calculate L for (L50 == 0.5 etc)

Value

L.value

Author(s)

Oxford Nanopore Bioinformatics, [email protected]

References

https://www.ncbi.nlm.nih.gov/assembly/help/


sagrudd/tutorials documentation built on Dec. 7, 2018, 8:54 a.m.