sgibb/topdownr: Investigation of Fragmentation Conditions in Top-Down Proteomics
Version 1.3.1

The topdownr package allows automatic and systemic investigation of fragment conditions. It creates Thermo Orbitrap Fusion Lumos method files to test hundreds of fragmentation conditions. Additionally it provides functions to analyse and process the generated MS data and determine the best conditions to maximise overall fragment coverage.

Getting started

Package details

Bioconductor views Coverage Infrastructure MassSpectrometry Proteomics
Maintainer
LicenseGPL (>= 3)
Version1.3.1
URL https://github.com/sgibb/topdownr/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("sgibb/topdownr")
sgibb/topdownr documentation built on July 7, 2018, 1:38 a.m.