This repository contains scripts and data that can be used to reproduce the flux inference and kinetic model fitting results of Hackett 2016.
To install this repository as a local package run the following R code:
Vignettes are available that reproduce the flux inference and reaction equation fitting:
browseVignettes(package = "simmer")
Integrating boundary fluxes with the yeast metabolic reconstruction in order to estimate metabolic fluxes. This script makes use of the Gurobi optimizer and R package which are freely available for academic use.
Bayesian approach to fitting reaction equations to measured fluxes.
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