getAlignment: Computes indices of row and column of maximum scored...

Description Usage Arguments Value

Description

This function takes aligned object of the class NeedleObjAffine as an input. With the provided traceback path, it calculates row and column index pair associated with the highest scoring path through similarity matrix. Output is a list of row-column index pairs of all highest scoring traceback paths.

Usage

1
getAlignment(alignObj)

Arguments

alignObj

An object of class NeedleObjAffine

Value

A list of matrices having row and column indices of traceback path.


shubham1637/DIAlignR documentation built on May 8, 2019, 8:12 a.m.