Man pages for steinbaugh/basejump.experiment
Experiments

aggregateAggregate Rows or Columns
aggregateCellsToSamplesAggregate Cells to Samples
cell2sampleCell-to-Sample Mappings
combineCombining or merging different Bioconductor data structures
convertGenesToSymbolsConvert Genes to Symbols
convertSampleIDsToNamesConvert Sample Identifiers to Names
convertTranscriptsToGenesConvert Transcripts to Genes
countsCounts
detectLanesDetect Sequencing Lanes
detectOrganismDetect Organism
geometricMeanGeometric Mean
interestingGroupsInteresting Groups
logRatioInterconvert Log Ratio and Fold Change Values
makeSingleCellExperimentMake Single-Cell Experiment
makeSummarizedExperimentMake Summarized Experiment
mapCellsToSamplesMap Cells to Samples
mapGenesMap Genes
matchInterestingGroupsMatch Interesting Groups
meltCountsMelt Count Matrix to Long Format
metricsMetrics
microplateMicrotiter Plate Well Identifiers
minimalSampleDataMinimal Sample Data
organismOrganism
reexportsObjects exported from other packages
sampleDataSample Data
sampleNamesSample Names
selectSamplesSelect Samples
subsetPerSampleSubset Per Sample
topCellsPerSampleTop Cells per Sample
tpmTranscripts per Million
uniteInterestingGroupsUnite Interesting Groups
zerosVsDepthPercentage of Zeros vs. Library Depth
steinbaugh/basejump.experiment documentation built on Nov. 5, 2018, 10:36 p.m.