Files in stephaniehicks/methylCC
Estimate the cell composition of whole blood in DNA methylation samples
.gitignore
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/AllGenerics.R
R/datasets.R
R/estimatecc.R
R/find_dmrs.R
R/helper_functions.R
R/methods.R
README.md
data/FlowSorted.Blood.450k.sub.RData
data/offMethRegions.RData
data/onMethRegions.RData
inst/CITATION
inst/NEWS
inst/objectCreation.R
man/FlowSorted.Blood.450k.sub.Rd
man/cell_counts.Rd
man/dot-WFun.Rd
man/dot-extract_raw_data.Rd
man/dot-find_dmrs.Rd
man/dot-initializeMLEs.Rd
man/dot-initialize_theta.Rd
man/dot-methylcc_engine.Rd
man/dot-methylcc_estep.Rd
man/dot-methylcc_mstep.Rd
man/dot-pick_target_positions.Rd
man/dot-preprocess_estimatecc.Rd
man/dot-splitit.Rd
man/estimatecc-class.Rd
man/estimatecc.Rd
man/offMethRegions.Rd
man/onMethRegions.Rd
tests/testthat.R
tests/testthat/test-estimatecc.R
vignettes/methylCC.Rmd
