INGRID is a statistical approach that integrates information from biological pathway databases with high-throughput genomic data to improve the robustness for identification and interpretation of molecularly-defined subgroups of cancer patients.
To install the development version of INGRID, it's easiest to use the 'devtools' package.
#install.packages("devtools")
library(devtools)
install_github("sunny-zq/INGRID")
The R package vignette will provide a good start point for the genetic analysis using INGRID package, including the overview of INGRID package and the example command lines:
library(INGRID)
vignette("INGRID-example")
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