percMethylation-methods: get percent methylation scores from methylBase object

Description Usage Arguments Value Examples

Description

get percent methylation scores from methylBase object

Usage

1

Arguments

methylBase.obj

a methylBase object

rowids

if TRUE, matrix rownames have identifiers as base/region location (default:FALSE)

Value

matrix with percent methylation values per base/region across all samples, row names would be base/region identifiers

Examples

1
2
3
data(methylKit)
mat=percMethylation(methylBase.obj)
head(mat)

tectronics/methylkit documentation built on May 27, 2017, 4:14 a.m.