Files in tengfei/ggbio
Visualization tools for genomic data
.Rbuildignore
.Rinstignore
.github/workflows/R-CMD-check-and-coverage.yaml
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/AllClasses.R
R/AllGenerics.R
R/Cache-class.R
R/GGbio-class.R
R/Grob-class.R
R/Plot-class.R
R/Tracked-class.R
R/Tracks-class.R
R/autoplot-method.R
R/coord_genome-method.R
R/geom_alignment-method.R
R/geom_arch-method.R
R/geom_arrow-method.R
R/geom_arrowrect-method.R
R/geom_bar-method.R
R/geom_chevron-method.R
R/geom_rect-method.R
R/geom_segment-method.R
R/ggplot-method.R
R/hack.R
R/ideogram.R
R/layout_circle-method.R
R/layout_karyogram-method.R
R/layout_linear-method.R
R/plotFragLength-method.R
R/plotGrandLinear.R
R/plotRangesLinkedToData.R
R/plotSpliceSum-method.R
R/rescale-method.R
R/scales.R
R/stat_aggregate-method.R
R/stat_bin-method.R
R/stat_coverage-method.R
R/stat_gene-method.R
R/stat_identity-method.R
R/stat_mismatch-method.R
R/stat_reduce-method.R
R/stat_slice-method.R
R/stat_stepping-method.R
R/stat_table-method.R
R/theme.R
R/utils.R
R/zzz.R
README.md
TODO.org
inst/CITATION
inst/example/GGbio-class.R
man/Grob-class.Rd
man/Plot-class.Rd
man/Tracked-class.Rd
man/arrangeGrobByParsingLegend.Rd
man/autoplot-method.Rd
man/geom_alignment-method.Rd
man/geom_arch-method.Rd
man/geom_arrow-method.Rd
man/geom_arrowrect-method.Rd
man/geom_bar-method.Rd
man/geom_chevron-method.Rd
man/geom_rect-method.Rd
man/geom_segment-method.Rd
man/ggbio-class.Rd
man/ggplot-method.Rd
man/ggsave.Rd
man/layout_circle-method.Rd
man/layout_karyogram-method.Rd
man/nav.Rd
man/plotFragLength.Rd
man/plotGrandLinear.Rd
man/plotRangesLinkedToData.Rd
man/plotSingleChrom.Rd
man/plotSpliceSum.Rd
man/plotStackedOverview.Rd
man/rescale-method.Rd
man/scale_fill_fold_change.Rd
man/scale_fill_giemsa.Rd
man/scale_x_sequnit.Rd
man/stat_aggregate-method.Rd
man/stat_bin-method.Rd
man/stat_coverage-method.Rd
man/stat_gene-method.Rd
man/stat_identity-method.Rd
man/stat_mismatch-method.Rd
man/stat_reduce-method.Rd
man/stat_slice-method.Rd
man/stat_stepping-method.Rd
man/stat_table-method.Rd
man/theme.Rd
man/tracks.Rd
tests/test-all.R
tests/testthat/test_grob.R
vignettes/Makefile
vignettes/fakevignettes/ggbio.Rnw
vignettes/figures/Manhattan-plotGrandLinear.pdf
vignettes/figures/autoplot_GappedAlignment.pdf
vignettes/figures/cir-single.pdf
vignettes/figures/circular-9-circle.pdf
vignettes/figures/circular-lower-link-track.pdf
vignettes/figures/coord_genome.pdf
vignettes/figures/coord_linear.pdf
vignettes/figures/coord_truncate_gaps.pdf
vignettes/figures/diagram.pdf
vignettes/figures/drawing.pdf
vignettes/figures/facet.pdf
vignettes/figures/facet_gr.pdf
vignettes/figures/geom_alignment.pdf
vignettes/figures/geom_arch.pdf
vignettes/figures/geom_arrow.pdf
vignettes/figures/geom_arrowrect.pdf
vignettes/figures/geom_bar.pdf
vignettes/figures/geom_chevron.pdf
vignettes/figures/geom_rect.pdf
vignettes/figures/geom_segment.pdf
vignettes/figures/geoms.pdf
vignettes/figures/grl.pdf
vignettes/figures/icon.pdf
vignettes/figures/karyogram.pdf
vignettes/figures/layout_circle.pdf
vignettes/figures/layout_default.pdf
vignettes/figures/layout_karyogram.pdf
vignettes/figures/man.pdf
vignettes/figures/rangeslinkedtodata-link4.pdf
vignettes/figures/splice.pdf
vignettes/figures/ssx3.pdf
vignettes/figures/stat_aggregate.pdf
vignettes/figures/stat_coverage.pdf
vignettes/figures/stat_coverage_icon.pdf
vignettes/figures/stat_gene.pdf
vignettes/figures/stat_identity.pdf
vignettes/figures/stat_mismatch.pdf
vignettes/figures/stat_reduce.pdf
vignettes/figures/stat_stepping.pdf
vignettes/figures/stat_table.pdf
vignettes/figures/track_layout.pdf
vignettes/figures/truncate_gaps.pdf
vignettes/figures/ucsc.png
vignettes/figures/vcf.pdf
vignettes/ggbio.Rnw
vignettes/knit.sh
vignettes/realvignettes/ggbio.Rnw
