Files in thierrygosselin/assigner

Assignment Analysis with RADseq Data

.DS_Store

.Rbuildignore

.github/.gitignore

.github/ISSUE_TEMPLATE/bug_report.md .github/ISSUE_TEMPLATE/feature_request.md

.github/workflows/R-CMD-check.yaml

.gitignore

.travis.yml

DESCRIPTION

FEATURES.md LICENSE.md

NAMESPACE

NEWS.md R/assigner_dots.R R/assignment_ngs.R R/data.R R/dlr.R R/fst_NEI87.R R/fst_WC84.R R/global_variables.R R/utils.R README.Rmd README.md

_pkgdown.yml

assigner.Rproj

cran-comments.md

data/data_assigner_sim_01.rda

data/data_assigner_sim_02.rda

docs/FEATURES.html

docs/LICENSE.html

docs/apple-touch-icon-120x120.png

docs/apple-touch-icon-152x152.png

docs/apple-touch-icon-180x180.png

docs/apple-touch-icon-60x60.png

docs/apple-touch-icon-76x76.png

docs/apple-touch-icon.png

docs/articles/assigner_fst_tree_example.png

docs/articles/assignment.whitelists.html

docs/articles/assignment_loo_test4.png

docs/articles/assignment_thl_test1.png

docs/articles/assignment_thl_test1_full_range.png

docs/articles/assignment_thl_test2.png

docs/articles/assignment_thl_test3.png

docs/articles/fst_WC84_heatmap_fst.png

docs/articles/fst_confidence_intervals.html

docs/articles/get_started.html

docs/articles/index.html

docs/articles/life_cycle.html

docs/articles/rad_genomics_computer_setup.html

docs/articles/web_only/fst_comparisons.html

docs/articles/web_only/fst_comparisons_files/figure-html/plot the results-1.png

docs/authors.html

docs/docsearch.css

docs/docsearch.js

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docs/favicon.ico

docs/index.html

docs/link.svg

docs/logo.png

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Exposition_pipe_operator.html

docs/reference/assigner_parallel.html

docs/reference/assigner_stats.html

docs/reference/assignment_adegenet.html

docs/reference/assignment_gsi_sim.html

docs/reference/assignment_marker_loop.html

docs/reference/assignment_ngs.html

docs/reference/assignment_random.html

docs/reference/assignment_ranking.html

docs/reference/assignment_subsamples.html

docs/reference/boot_ci.html

docs/reference/boot_ci_nei.html

docs/reference/clean_marker_number.html

docs/reference/compound_assignment_pipe_operator.html

docs/reference/compute_fst.html

docs/reference/compute_fst_nei.html

docs/reference/data_assigner_sim_01.html

docs/reference/data_assigner_sim_02.html

docs/reference/dlr.html

docs/reference/dlr_relative.html

docs/reference/figures/logo.png

docs/reference/fst_NEI87.html

docs/reference/fst_WC84.html

docs/reference/fst_nei_subsample.html

docs/reference/fst_subsample.html

docs/reference/generate_holdhout.html

docs/reference/generate_subsamples.html

docs/reference/gsi_sim_binary.html

docs/reference/gsi_sim_binary_path.html

docs/reference/gsi_sim_exists.html

docs/reference/gsi_sim_is_executable.html

docs/reference/heatmap_fst.html

docs/reference/import_subsamples.html

docs/reference/import_subsamples_fst.html

docs/reference/index.html

docs/reference/install_gsi_sim.html

docs/reference/marker_selection.html

docs/reference/n.html

docs/reference/pairwise_fst.html

docs/reference/pairwise_fst_nei.html

docs/reference/pipe.html

docs/reference/plot_assignment.html

docs/reference/plot_dlr.html

docs/reference/subsampling_data.html

inst/CITATION

man/.Rapp.history

man/Exposition_pipe_operator.Rd man/assign_defaults.Rd man/assigner_dots.Rd man/assigner_fst_stats.Rd man/assigner_function_header.Rd man/assigner_future.Rd man/assigner_stats.Rd man/assigner_tic.Rd man/assigner_toc.Rd man/assignment_adegenet.Rd man/assignment_gsi_sim.Rd man/assignment_marker_loop.Rd man/assignment_ngs.Rd man/assignment_random.Rd man/assignment_ranking.Rd man/assignment_subsamples.Rd man/boot_ci.Rd man/boot_ci_nei.Rd man/change_matrix_strata.Rd man/check_args_class.Rd man/clean_marker_number.Rd man/compound_assignment_pipe_operator.Rd man/compute_fst.Rd man/compute_fst_nei.Rd man/data_assigner_sim_01.Rd man/data_assigner_sim_02.Rd man/dlr.Rd man/dlr_relative.Rd man/extract_dots.Rd

man/figures/logo.png

man/fst_NEI87.Rd man/fst_WC84.Rd man/fst_nei_subsample.Rd man/fst_stats.Rd man/fst_subsample.Rd man/fst_write.Rd man/generate_holdhout.Rd man/generate_subsamples.Rd man/gsi_sim_binary.Rd man/gsi_sim_binary_path.Rd man/gsi_sim_exists.Rd man/gsi_sim_is_executable.Rd man/heatmap_fst.Rd man/import_subsamples.Rd man/import_subsamples_fst.Rd man/install_gsi_sim.Rd man/marker_selection.Rd man/match_markers_meta.Rd man/message_func_call.Rd man/n.Rd man/pairwise_fst.Rd man/pairwise_fst_nei.Rd man/parallel_core_opt.Rd man/pipe.Rd man/plot_assignment.Rd man/plot_dlr.Rd man/rad_long.Rd man/rad_wide.Rd man/subsampling_data.Rd

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-180x180.png

pkgdown/favicon/apple-touch-icon-60x60.png

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pkgdown/favicon/favicon-16x16.png

pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

vignettes/.DS_Store

vignettes/.gitignore

vignettes/assigner_fst_tree_example.png

vignettes/assignment.whitelists.Rmd

vignettes/assignment.whitelists.html

vignettes/assignment_loo_test4.png

vignettes/assignment_thl_test1.png

vignettes/assignment_thl_test1_full_range.png

vignettes/assignment_thl_test2.png

vignettes/assignment_thl_test3.png

vignettes/automator.png

vignettes/copy_path.png

vignettes/fst_WC84_heatmap_fst.png

vignettes/fst_confidence_intervals.Rmd

vignettes/fst_confidence_intervals.html

vignettes/get_started.Rmd vignettes/life_cycle.Rmd

vignettes/membership_dataset1.png

vignettes/membership_dataset2.png

vignettes/rad_genomics_computer_setup.Rmd

vignettes/rad_genomics_computer_setup.html

vignettes/terminal_folder_shortcut.png

vignettes/web_only/fst.summary.sim01.tsv

vignettes/web_only/fst.summary.sim02.tsv

vignettes/web_only/fst.summary.tsv

vignettes/web_only/fst_comparisons.Rmd

vignettes/web_only/fst_comparisons_packages_features.tsv

thierrygosselin/assigner documentation built on Oct. 28, 2020, 5:47 p.m.