revdep-all/dplyr/failures.md

airGR

Run revdep_details(,"airGR") for more info

In both

Installation

Devel

* installing *source* package ‘airGR’ ...
** package ‘airGR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c airGR.c -o airGR.o
gfortran-8  -fPIC  -Wall -g -O2  -c frun_cemaneige.f -o frun_cemaneige.o
make: gfortran-8: No such file or directory
make: *** [frun_cemaneige.o] Error 1
ERROR: compilation failed for package ‘airGR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/airGR/new/airGR.Rcheck/airGR’

CRAN

* installing *source* package ‘airGR’ ...
** package ‘airGR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c airGR.c -o airGR.o
gfortran-8  -fPIC  -Wall -g -O2  -c frun_cemaneige.f -o frun_cemaneige.o
make: gfortran-8: No such file or directory
make: *** [frun_cemaneige.o] Error 1
ERROR: compilation failed for package ‘airGR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/airGR/old/airGR.Rcheck/airGR’

annotation

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Hsapiens.UCSC.hg19’, ‘Homo.sapiens’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘TxDb.Athaliana.BioMart.plantsmart22’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’, ‘TxDb.Hsapiens.UCSC.hg38.knownGene’, ‘TxDb.Mmusculus.UCSC.mm10.ensGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Hsapiens.UCSC.hg19’, ‘Homo.sapiens’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘TxDb.Athaliana.BioMart.plantsmart22’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’, ‘TxDb.Hsapiens.UCSC.hg38.knownGene’, ‘TxDb.Mmusculus.UCSC.mm10.ensGene’



annotatr

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Dm.eg.db’, ‘org.Gg.eg.db’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘org.Rn.eg.db’, ‘TxDb.Dmelanogaster.UCSC.dm3.ensGene’, ‘TxDb.Dmelanogaster.UCSC.dm6.ensGene’, ‘TxDb.Ggallus.UCSC.galGal5.refGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’, ‘TxDb.Hsapiens.UCSC.hg38.knownGene’, ‘TxDb.Mmusculus.UCSC.mm10.knownGene’, ‘TxDb.Mmusculus.UCSC.mm9.knownGene’, ‘TxDb.Rnorvegicus.UCSC.rn4.ensGene’, ‘TxDb.Rnorvegicus.UCSC.rn5.refGene’, ‘TxDb.Rnorvegicus.UCSC.rn6.refGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Dm.eg.db’, ‘org.Gg.eg.db’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘org.Rn.eg.db’, ‘TxDb.Dmelanogaster.UCSC.dm3.ensGene’, ‘TxDb.Dmelanogaster.UCSC.dm6.ensGene’, ‘TxDb.Ggallus.UCSC.galGal5.refGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’, ‘TxDb.Hsapiens.UCSC.hg38.knownGene’, ‘TxDb.Mmusculus.UCSC.mm10.knownGene’, ‘TxDb.Mmusculus.UCSC.mm9.knownGene’, ‘TxDb.Rnorvegicus.UCSC.rn4.ensGene’, ‘TxDb.Rnorvegicus.UCSC.rn5.refGene’, ‘TxDb.Rnorvegicus.UCSC.rn6.refGene’



bioCancer

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘org.Hs.eg.db’, ‘reactome.db’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘org.Hs.eg.db’, ‘reactome.db’



BiocOncoTK

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘EnsDb.Hsapiens.v75’, ‘FDb.InfiniumMethylation.hg19’, ‘org.Hs.eg.db’, ‘TxDb.Hsapiens.UCSC.hg18.knownGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘EnsDb.Hsapiens.v75’, ‘FDb.InfiniumMethylation.hg19’, ‘org.Hs.eg.db’, ‘TxDb.Hsapiens.UCSC.hg18.knownGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



brunnermunzel

Run revdep_details(,"brunnermunzel") for more info

In both

Installation

Devel

* installing *source* package ‘brunnermunzel’ ...
** package ‘brunnermunzel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c Rf_wrapper.c -o Rf_wrapper.o
gfortran-8  -fPIC  -Wall -g -O2  -c bm_permutation_stat.f -o bm_permutation_stat.o
make: gfortran-8: No such file or directory
make: *** [bm_permutation_stat.o] Error 1
ERROR: compilation failed for package ‘brunnermunzel’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/brunnermunzel/new/brunnermunzel.Rcheck/brunnermunzel’

CRAN

* installing *source* package ‘brunnermunzel’ ...
** package ‘brunnermunzel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c Rf_wrapper.c -o Rf_wrapper.o
gfortran-8  -fPIC  -Wall -g -O2  -c bm_permutation_stat.f -o bm_permutation_stat.o
make: gfortran-8: No such file or directory
make: *** [bm_permutation_stat.o] Error 1
ERROR: compilation failed for package ‘brunnermunzel’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/brunnermunzel/old/brunnermunzel.Rcheck/brunnermunzel’

CAGEWorkflow

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Mmusculus.UCSC.mm9’, ‘JASPAR2016’, ‘nanotubes’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘TxDb.Mmusculus.UCSC.mm9.knownGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Mmusculus.UCSC.mm9’, ‘JASPAR2016’, ‘nanotubes’, ‘org.Hs.eg.db’, ‘org.Mm.eg.db’, ‘TxDb.Mmusculus.UCSC.mm9.knownGene’



Cardinal

Run revdep_details(,"Cardinal") for more info

In both

Installation

Devel

* installing *source* package ‘Cardinal’ ...
** using staged installation
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -mtune=core2 -O3 -c DIP.cpp -o DIP.o
In file included from DIP.cpp:2:
In file included from ./Cardinal.h:9:
In file included from /Library/Frameworks/R.framework/Resources/include/Rinternals.h:36:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/cstddef:45:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__nullptr:35:5: error: templates must have C++ linkage
    template <class _Tp>
    ^~~~~~~~~~~~~~~~~~~~
./Cardinal.h:7:1: note: extern "C" language linkage specification begins here
extern "C"
^
In file included from DIP.cpp:2:
In file included from ./Cardinal.h:9:
In file included from /Library/Frameworks/R.framework/Resources/include/Rinternals.h:36:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/cstddef:45:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__nullptr:39:5: error: templates must have C++ linkage
    template <class _Tp, class _Up>
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Cardinal.h:7:1: note: extern "C" language linkage specification begins here
extern "C"
^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
        double gamma[size];
                    ^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
DIP.cpp:142:11: note: in instantiation of function template specialization 'gaussian_filter<int>' requested here
                        return gaussian_filter<int>(x, Rf_asInteger(r), Rf_asReal(sd), R_NilValue);
                               ^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
        double gamma[size];
                    ^
DIP.cpp:144:11: note: in instantiation of function template specialization 'gaussian_filter<double>' requested here
                        return gaussian_filter<double>(x, Rf_asInteger(r), Rf_asReal(sd), R_NilValue);
                               ^
3 warnings and 2 errors generated.
make: *** [DIP.o] Error 1
ERROR: compilation failed for package ‘Cardinal’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/Cardinal/new/Cardinal.Rcheck/Cardinal’

CRAN

* installing *source* package ‘Cardinal’ ...
** using staged installation
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -mtune=core2 -O3 -c DIP.cpp -o DIP.o
In file included from DIP.cpp:2:
In file included from ./Cardinal.h:9:
In file included from /Library/Frameworks/R.framework/Resources/include/Rinternals.h:36:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/cstddef:45:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__nullptr:35:5: error: templates must have C++ linkage
    template <class _Tp>
    ^~~~~~~~~~~~~~~~~~~~
./Cardinal.h:7:1: note: extern "C" language linkage specification begins here
extern "C"
^
In file included from DIP.cpp:2:
In file included from ./Cardinal.h:9:
In file included from /Library/Frameworks/R.framework/Resources/include/Rinternals.h:36:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/cstddef:45:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__nullptr:39:5: error: templates must have C++ linkage
    template <class _Tp, class _Up>
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Cardinal.h:7:1: note: extern "C" language linkage specification begins here
extern "C"
^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
        double gamma[size];
                    ^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
DIP.cpp:142:11: note: in instantiation of function template specialization 'gaussian_filter<int>' requested here
                        return gaussian_filter<int>(x, Rf_asInteger(r), Rf_asReal(sd), R_NilValue);
                               ^
DIP.cpp:12:14: warning: variable length arrays are a C99 feature [-Wvla-extension]
        double gamma[size];
                    ^
DIP.cpp:144:11: note: in instantiation of function template specialization 'gaussian_filter<double>' requested here
                        return gaussian_filter<double>(x, Rf_asInteger(r), Rf_asReal(sd), R_NilValue);
                               ^
3 warnings and 2 errors generated.
make: *** [DIP.o] Error 1
ERROR: compilation failed for package ‘Cardinal’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/Cardinal/old/Cardinal.Rcheck/Cardinal’

CATALYST

Run revdep_details(,"CATALYST") for more info

In both

ChIPseeker

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘org.Hs.eg.db’, ‘reactome.db’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘org.Hs.eg.db’, ‘reactome.db’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



cicero

Run revdep_details(,"cicero") for more info

In both

CINdex

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘Homo.sapiens’, ‘org.Hs.eg.db’, ‘pd.genomewidesnp.6’, ‘reactome.db’, ‘TxDb.Hsapiens.UCSC.hg18.knownGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘DO.db’, ‘Homo.sapiens’, ‘org.Hs.eg.db’, ‘pd.genomewidesnp.6’, ‘reactome.db’, ‘TxDb.Hsapiens.UCSC.hg18.knownGene’, ‘TxDb.Hsapiens.UCSC.hg19.knownGene’



clustermq

Run revdep_details(,"clustermq") for more info

In both

codemetar

Run revdep_details(,"codemetar") for more info

In both

corrcoverage

Run revdep_details(,"corrcoverage") for more info

In both

Installation

Devel

* installing *source* package ‘corrcoverage’ ...
** package ‘corrcoverage’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/corrcoverage/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/corrcoverage/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘corrcoverage’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/corrcoverage/new/corrcoverage.Rcheck/corrcoverage’

CRAN

* installing *source* package ‘corrcoverage’ ...
** package ‘corrcoverage’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/corrcoverage/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/corrcoverage/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘corrcoverage’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/corrcoverage/old/corrcoverage.Rcheck/corrcoverage’

DepthProc

Run revdep_details(,"DepthProc") for more info

In both

Installation

Devel

* installing *source* package ‘DepthProc’ ...
** package ‘DepthProc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/DepthProc/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/DepthProc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c Depth.cpp -o Depth.o
clang: error: unsupported option '-fopenmp'
make: *** [Depth.o] Error 1
ERROR: compilation failed for package ‘DepthProc’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/DepthProc/new/DepthProc.Rcheck/DepthProc’

CRAN

* installing *source* package ‘DepthProc’ ...
** package ‘DepthProc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/DepthProc/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/DepthProc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c Depth.cpp -o Depth.o
clang: error: unsupported option '-fopenmp'
make: *** [Depth.o] Error 1
ERROR: compilation failed for package ‘DepthProc’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/DepthProc/old/DepthProc.Rcheck/DepthProc’

DiffBind

Run revdep_details(,"DiffBind") for more info

In both

downscaledl

Run revdep_details(,"downscaledl") for more info

In both

Installation

Devel

* installing *source* package ‘downscaledl’ ...
** package ‘downscaledl’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/downscaledl/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/downscaledl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘downscaledl’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/downscaledl/new/downscaledl.Rcheck/downscaledl’

CRAN

* installing *source* package ‘downscaledl’ ...
** package ‘downscaledl’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/downscaledl/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/downscaledl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘downscaledl’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/downscaledl/old/downscaledl.Rcheck/downscaledl’

fastLink

Run revdep_details(,"fastLink") for more info

In both

Installation

Devel

* installing *source* package ‘fastLink’ ...
** package ‘fastLink’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/RcppArmadillo/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -mtune=core2 -O3 -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘fastLink’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/fastLink/new/fastLink.Rcheck/fastLink’

CRAN

* installing *source* package ‘fastLink’ ...
** package ‘fastLink’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/RcppArmadillo/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/fastLink/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -mtune=core2 -O3 -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘fastLink’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/fastLink/old/fastLink.Rcheck/fastLink’

FSelectorRcpp

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
mvtnorm 1.0-11 1.0-12              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source package ‘RTCGA.rnaseq’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
mvtnorm 1.0-11 1.0-12              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source package ‘RTCGA.rnaseq’



gap

Run revdep_details(,"gap") for more info

In both

Installation

Devel

* installing *source* package ‘gap’ ...
** package ‘gap’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c 2k.c -o 2k.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c 2ld.c -o 2ld.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c cline.c -o cline.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gcontrol_c.c -o gcontrol_c.o
gcontrol_c.c:757:53: warning: if statement has empty body [-Wempty-body]
      if(i>=*burn && j==0) /*printf("%14.9f \n",p)*/;
                                                    ^
gcontrol_c.c:757:53: note: put the semicolon on a separate line to silence this warning
1 warning generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gcx.c -o gcx.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gif_c.c -o gif_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c hap_c.c -o hap_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c hwe.hardy.c -o hwe.hardy.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c kin.morgan.c -o kin.morgan.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c makeped_c.c -o makeped_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c mia.c -o mia.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c muvar.c -o muvar.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c package_native_routine_registration_skeleton.c -o package_native_routine_registration_skeleton.o
gfortran-8  -fPIC  -Wall -g -O2  -c pfc.f -o pfc.o
make: gfortran-8: No such file or directory
make: *** [pfc.o] Error 1
ERROR: compilation failed for package ‘gap’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/gap/new/gap.Rcheck/gap’

CRAN

* installing *source* package ‘gap’ ...
** package ‘gap’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c 2k.c -o 2k.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c 2ld.c -o 2ld.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c cline.c -o cline.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gcontrol_c.c -o gcontrol_c.o
gcontrol_c.c:757:53: warning: if statement has empty body [-Wempty-body]
      if(i>=*burn && j==0) /*printf("%14.9f \n",p)*/;
                                                    ^
gcontrol_c.c:757:53: note: put the semicolon on a separate line to silence this warning
1 warning generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gcx.c -o gcx.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c gif_c.c -o gif_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c hap_c.c -o hap_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c hwe.hardy.c -o hwe.hardy.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c kin.morgan.c -o kin.morgan.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c makeped_c.c -o makeped_c.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c mia.c -o mia.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c muvar.c -o muvar.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include  -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c package_native_routine_registration_skeleton.c -o package_native_routine_registration_skeleton.o
gfortran-8  -fPIC  -Wall -g -O2  -c pfc.f -o pfc.o
make: gfortran-8: No such file or directory
make: *** [pfc.o] Error 1
ERROR: compilation failed for package ‘gap’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/gap/old/gap.Rcheck/gap’

GAPGOM

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Ag.eg.db’, ‘org.At.tair.db’, ‘org.Bt.eg.db’, ‘org.Ce.eg.db’, ‘org.Cf.eg.db’, ‘org.Dm.eg.db’, ‘org.Dr.eg.db’, ‘org.EcK12.eg.db’, ‘org.EcSakai.eg.db’, ‘org.Gg.eg.db’, ‘org.Mmu.eg.db’, ‘org.Pf.plasmo.db’, ‘org.Pt.eg.db’, ‘org.Rn.eg.db’, ‘org.Sc.sgd.db’, ‘org.Ss.eg.db’, ‘org.Xl.eg.db’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Ag.eg.db’, ‘org.At.tair.db’, ‘org.Bt.eg.db’, ‘org.Ce.eg.db’, ‘org.Cf.eg.db’, ‘org.Dm.eg.db’, ‘org.Dr.eg.db’, ‘org.EcK12.eg.db’, ‘org.EcSakai.eg.db’, ‘org.Gg.eg.db’, ‘org.Mmu.eg.db’, ‘org.Pf.plasmo.db’, ‘org.Pt.eg.db’, ‘org.Rn.eg.db’, ‘org.Sc.sgd.db’, ‘org.Ss.eg.db’, ‘org.Xl.eg.db’



gastempt

Run revdep_details(,"gastempt") for more info

Newly fixed

In both

geneXtendeR

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Ag.eg.db’, ‘org.Bt.eg.db’, ‘org.Ce.eg.db’, ‘org.Cf.eg.db’, ‘org.Dm.eg.db’, ‘org.Dr.eg.db’, ‘org.Gg.eg.db’, ‘org.Pt.eg.db’, ‘org.Rn.eg.db’, ‘org.Sc.sgd.db’, ‘org.Ss.eg.db’, ‘org.Xl.eg.db’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘org.Ag.eg.db’, ‘org.Bt.eg.db’, ‘org.Ce.eg.db’, ‘org.Cf.eg.db’, ‘org.Dm.eg.db’, ‘org.Dr.eg.db’, ‘org.Gg.eg.db’, ‘org.Pt.eg.db’, ‘org.Rn.eg.db’, ‘org.Sc.sgd.db’, ‘org.Ss.eg.db’, ‘org.Xl.eg.db’



gQTLstats

Run revdep_details(,"gQTLstats") for more info

In both

graphicalVAR

Run revdep_details(,"graphicalVAR") for more info

In both

Installation

Devel

* installing *source* package ‘graphicalVAR’ ...
** package ‘graphicalVAR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/graphicalVAR/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/graphicalVAR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘graphicalVAR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/graphicalVAR/new/graphicalVAR.Rcheck/graphicalVAR’

CRAN

* installing *source* package ‘graphicalVAR’ ...
** package ‘graphicalVAR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/graphicalVAR/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/graphicalVAR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘graphicalVAR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/graphicalVAR/old/graphicalVAR.Rcheck/graphicalVAR’

grasp2db

Run revdep_details(,"grasp2db") for more info

In both

heatwaveR

Run revdep_details(,"heatwaveR") for more info

In both

Installation

Devel

* installing *source* package ‘heatwaveR’ ...
** package ‘heatwaveR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/heatwaveR/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/heatwaveR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘heatwaveR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/heatwaveR/new/heatwaveR.Rcheck/heatwaveR’

CRAN

* installing *source* package ‘heatwaveR’ ...
** package ‘heatwaveR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/heatwaveR/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/heatwaveR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘heatwaveR’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/heatwaveR/old/heatwaveR.Rcheck/heatwaveR’

ICAMS

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Hsapiens.1000genomes.hs37d5’, ‘BSgenome.Mmusculus.UCSC.mm10’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘BSgenome.Hsapiens.1000genomes.hs37d5’, ‘BSgenome.Mmusculus.UCSC.mm10’



idefix

Run revdep_details(,"idefix") for more info

In both

Installation

Devel

* installing *source* package ‘idefix’ ...
** package ‘idefix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/idefix/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/idefix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c InfoDes_cpp.cpp -o InfoDes_cpp.o
clang: error: unsupported option '-fopenmp'
make: *** [InfoDes_cpp.o] Error 1
ERROR: compilation failed for package ‘idefix’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/idefix/new/idefix.Rcheck/idefix’

CRAN

* installing *source* package ‘idefix’ ...
** package ‘idefix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/idefix/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/idefix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c InfoDes_cpp.cpp -o InfoDes_cpp.o
clang: error: unsupported option '-fopenmp'
make: *** [InfoDes_cpp.o] Error 1
ERROR: compilation failed for package ‘idefix’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/idefix/old/idefix.Rcheck/idefix’

imager

Run revdep_details(,"imager") for more info

In both

Installation

Devel

* installing *source* package ‘imager’ ...
** package ‘imager’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for X... no
configure: error: X11 not found but required, configure aborted.
ERROR: configuration failed for package ‘imager’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/imager/new/imager.Rcheck/imager’

CRAN

* installing *source* package ‘imager’ ...
** package ‘imager’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for X... no
configure: error: X11 not found but required, configure aborted.
ERROR: configuration failed for package ‘imager’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/imager/old/imager.Rcheck/imager’

iRF

Run revdep_details(,"iRF") for more info

In both

Installation

Devel

* installing *source* package ‘iRF’ ...
** package ‘iRF’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/iRF/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c ExportedFunctionsRIT.cpp -o ExportedFunctionsRIT.o
clang: error: unsupported option '-fopenmp'
make: *** [ExportedFunctionsRIT.o] Error 1
ERROR: compilation failed for package ‘iRF’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/iRF/new/iRF.Rcheck/iRF’

CRAN

* installing *source* package ‘iRF’ ...
** package ‘iRF’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/iRF/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c ExportedFunctionsRIT.cpp -o ExportedFunctionsRIT.o
clang: error: unsupported option '-fopenmp'
make: *** [ExportedFunctionsRIT.o] Error 1
ERROR: compilation failed for package ‘iRF’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/iRF/old/iRF.Rcheck/iRF’

lpirfs

Run revdep_details(,"lpirfs") for more info

In both

Installation

Devel

* installing *source* package ‘lpirfs’ ...
** package ‘lpirfs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/lpirfs/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/lpirfs/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘lpirfs’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/lpirfs/new/lpirfs.Rcheck/lpirfs’

CRAN

* installing *source* package ‘lpirfs’ ...
** package ‘lpirfs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/lpirfs/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/lpirfs/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘lpirfs’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/lpirfs/old/lpirfs.Rcheck/lpirfs’

miceFast

Run revdep_details(,"miceFast") for more info

In both

Installation

Devel

* installing *source* package ‘miceFast’ ...
** package ‘miceFast’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/miceFast/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/miceFast/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c R_funs.cpp -o R_funs.o
clang: error: unsupported option '-fopenmp'
make: *** [R_funs.o] Error 1
ERROR: compilation failed for package ‘miceFast’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/miceFast/new/miceFast.Rcheck/miceFast’

CRAN

* installing *source* package ‘miceFast’ ...
** package ‘miceFast’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/miceFast/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/miceFast/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c R_funs.cpp -o R_funs.o
clang: error: unsupported option '-fopenmp'
make: *** [R_funs.o] Error 1
ERROR: compilation failed for package ‘miceFast’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/miceFast/old/miceFast.Rcheck/miceFast’

MixMatrix

Run revdep_details(,"MixMatrix") for more info

In both

Installation

Devel

* installing *source* package ‘MixMatrix’ ...
** package ‘MixMatrix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/MixMatrix/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/MixMatrix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘MixMatrix’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/MixMatrix/new/MixMatrix.Rcheck/MixMatrix’

CRAN

* installing *source* package ‘MixMatrix’ ...
** package ‘MixMatrix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/MixMatrix/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/MixMatrix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘MixMatrix’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/MixMatrix/old/MixMatrix.Rcheck/MixMatrix’

PAST

Run revdep_details(,"PAST") for more info

In both

PathwaySplice

Run revdep_details(,"PathwaySplice") for more info

In both

poppr

Run revdep_details(,"poppr") for more info

In both

Installation

Devel

* installing *source* package ‘poppr’ ...
** package ‘poppr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c adjust_missing.c -o adjust_missing.o
clang: error: unsupported option '-fopenmp'
make: *** [adjust_missing.o] Error 1
ERROR: compilation failed for package ‘poppr’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/poppr/new/poppr.Rcheck/poppr’

CRAN

* installing *source* package ‘poppr’ ...
** package ‘poppr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c adjust_missing.c -o adjust_missing.o
clang: error: unsupported option '-fopenmp'
make: *** [adjust_missing.o] Error 1
ERROR: compilation failed for package ‘poppr’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/poppr/old/poppr.Rcheck/poppr’

psychonetrics

Run revdep_details(,"psychonetrics") for more info

In both

Installation

Devel

* installing *source* package ‘psychonetrics’ ...
** package ‘psychonetrics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_USE_OPENMP -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/RcppArmadillo/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/pbv/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c 04_generalfit_loglik_fimlcpp.cpp -o 04_generalfit_loglik_fimlcpp.o
clang: error: unsupported option '-fopenmp'
make: *** [04_generalfit_loglik_fimlcpp.o] Error 1
ERROR: compilation failed for package ‘psychonetrics’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/psychonetrics/new/psychonetrics.Rcheck/psychonetrics’

CRAN

* installing *source* package ‘psychonetrics’ ...
** package ‘psychonetrics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_USE_OPENMP -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/RcppArmadillo/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/psychonetrics/pbv/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c 04_generalfit_loglik_fimlcpp.cpp -o 04_generalfit_loglik_fimlcpp.o
clang: error: unsupported option '-fopenmp'
make: *** [04_generalfit_loglik_fimlcpp.o] Error 1
ERROR: compilation failed for package ‘psychonetrics’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/psychonetrics/old/psychonetrics.Rcheck/psychonetrics’

qgraph

Run revdep_details(,"qgraph") for more info

In both

Installation

Devel

* installing *source* package ‘qgraph’ ...
** package ‘qgraph’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/qgraph/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘qgraph’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/qgraph/new/qgraph.Rcheck/qgraph’

CRAN

* installing *source* package ‘qgraph’ ...
** package ‘qgraph’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/qgraph/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘qgraph’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/qgraph/old/qgraph.Rcheck/qgraph’

resautonet

Run revdep_details(,"resautonet") for more info

In both

Installation

Devel

* installing *source* package ‘resautonet’ ...
** package ‘resautonet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/resautonet/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/resautonet/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘resautonet’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/resautonet/new/resautonet.Rcheck/resautonet’

CRAN

* installing *source* package ‘resautonet’ ...
** package ‘resautonet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/resautonet/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/resautonet/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘resautonet’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/resautonet/old/resautonet.Rcheck/resautonet’

RforProteomics

Run revdep_details(,"") for more info

Error before installation

Devel


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
mvtnorm 1.0-11 1.0-12              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘msdata’, ‘synapterdata’



CRAN


  There are binary versions available but the source versions are later:
        binary source needs_compilation
fansi    0.4.0  0.4.1              TRUE
mvtnorm 1.0-11 1.0-12              TRUE
stringi  1.4.3  1.4.4              TRUE

  Binaries will be installed


installing the source packages ‘msdata’, ‘synapterdata’



rstap

Run revdep_details(,"rstap") for more info

In both

sarima

Run revdep_details(,"sarima") for more info

In both

Installation

Devel

* installing *source* package ‘sarima’ ...
** package ‘sarima’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/sarima/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/sarima/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c Kalman0b.cpp -o Kalman0b.o
clang: error: unsupported option '-fopenmp'
make: *** [Kalman0b.o] Error 1
ERROR: compilation failed for package ‘sarima’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/sarima/new/sarima.Rcheck/sarima’

CRAN

* installing *source* package ‘sarima’ ...
** package ‘sarima’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/sarima/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/sarima/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c Kalman0b.cpp -o Kalman0b.o
clang: error: unsupported option '-fopenmp'
make: *** [Kalman0b.o] Error 1
ERROR: compilation failed for package ‘sarima’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/sarima/old/sarima.Rcheck/sarima’

scater

Run revdep_details(,"scater") for more info

In both

simputation

Run revdep_details(,"simputation") for more info

In both

Installation

Devel

* installing *source* package ‘simputation’ ...
** package ‘simputation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c R_register_native.c -o R_register_native.o
clang: error: unsupported option '-fopenmp'
make: *** [R_register_native.o] Error 1
ERROR: compilation failed for package ‘simputation’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/simputation/new/simputation.Rcheck/simputation’

CRAN

* installing *source* package ‘simputation’ ...
** package ‘simputation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC  -Wall -g -O2   -Wall -pedantic -fno-common -mtune=core2  -O3 -c R_register_native.c -o R_register_native.o
clang: error: unsupported option '-fopenmp'
make: *** [R_register_native.o] Error 1
ERROR: compilation failed for package ‘simputation’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/simputation/old/simputation.Rcheck/simputation’

SpaDES.core

Run revdep_details(,"SpaDES.core") for more info

In both

TitanCNA

Run revdep_details(,"TitanCNA") for more info

In both

weibulltools

Run revdep_details(,"weibulltools") for more info

In both

Installation

Devel

* installing *source* package ‘weibulltools’ ...
** package ‘weibulltools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/weibulltools/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/weibulltools/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘weibulltools’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/weibulltools/new/weibulltools.Rcheck/weibulltools’

CRAN

* installing *source* package ‘weibulltools’ ...
** package ‘weibulltools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -std=c++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/weibulltools/Rcpp/include" -I"/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/library.noindex/weibulltools/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp  -fPIC  -Wall -g -O2  -arch x86_64 -ftemplate-depth-256 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang: error: unsupported option '-fopenmp'
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘weibulltools’
* removing ‘/Users/lionel/Desktop/tidyselect/revdep-all/dplyr/checks.noindex/weibulltools/old/weibulltools.Rcheck/weibulltools’

XBSeq

Run revdep_details(,"XBSeq") for more info

In both



tidyverse/tidyselect documentation built on Jan. 28, 2020, 1:13 a.m.