R/gene_symbol_list.R
In timchurches/genes2anzctR: g2d2t: matching genes and mutation to drugs using in clinical trials
library(org.Hs.eg.db)
uniKeys <- keys(org.Hs.eg.db, keytype="ENTREZID")
cols <- c("SYMBOL")
a <- select(org.Hs.eg.db, keys=uniKeys, columns=cols, keytype="ENTREZID")
a$term <- a$SYMBOL
a$associated_id <- a$ENTREZID
a %>% dplyr::select(associated_id, term) %>% mutate(type="ENTREZID") %>% write_csv("data/entrezid_terms.csv")
timchurches/genes2anzctR documentation built on May 29, 2019, 9:53 a.m.
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library(org.Hs.eg.db)
uniKeys <- keys(org.Hs.eg.db, keytype="ENTREZID")
cols <- c("SYMBOL")
a <- select(org.Hs.eg.db, keys=uniKeys, columns=cols, keytype="ENTREZID")
a$term <- a$SYMBOL
a$associated_id <- a$ENTREZID
a %>% dplyr::select(associated_id, term) %>% mutate(type="ENTREZID") %>% write_csv("data/entrezid_terms.csv")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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