plotLBB.ts: Plotting LBB results over time

Description Usage Arguments Details References

View source: R/LBB.R

Description

Function to plot main results of a LBB assessment as time series graphs

Usage

1
plotLBB.ts(lfq, mmUser = FALSE, GausSel = FALSE)

Arguments

lfq

A list of the class "lfq" consisting of following parameters:

  • species species name,

  • stock stock ID or name,

  • midLengths midpoints of the length classes,

  • dates dates of sampling times (class Date),

  • catch matrix with catches/counts per length class (row) and sampling date (column),

  • comments comments;

mmUser

Logical; indicating the unit of length measurements, where TRUE indicates that lengths are in mm and FALSE (default) indicate that lengths are in cm.

GausSel

Logical; indicating the selectivity pattern. If FALSE (default) trawl-like, if TRUE gaussian selectivity is assumed.

Details

Expects lengths relative to Linf (L/Linf)

References

R. Froese, H. Winker, G. Coro, N. Demirel, A.C. Tsikliras, D. Dimarchopoulou, G. Scarcella, W.N. Probst, M. Dureuil, and D. Pauly (2018) A new approach for estimating stock status from length frequency data. ICES Journal of Marine Science. DOI: 10.1093/icesjms/fsy078


tokami/TropFishR documentation built on Aug. 24, 2018, 11:31 p.m.