Files in tpetzoldt/antibioticR

Analysis of Antibiotic Resistance Data

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NAMESPACE.default

R/ECOFFinder.R R/aaa_oldclasses.R R/abr_baseclass.R R/abr_densfunctions.R R/abr_methods.R R/abr_quantile.R R/abr_summary.R R/antibioticR-internal.R R/antibioticR-package.R R/ecoffinder-internal-plot-decoff.R R/ecoffinder-internal-plot-pecoff.R R/ecoffinder-plot-methods.R R/ecoffinder_nls.R R/ecoffinder_startpar.R R/fit_unimix.R R/micdata.R R/mixParmDf2parmlist.R R/mxObj-class.R R/mxObj-coerce.R R/mxObj-methods.R R/mx_compare.R R/mx_diagnostics.R R/mx_guess_components.R R/mx_metafit.R R/mx_parmlist_sort.R R/mx_plot.R R/mx_results.R R/parmList.R R/peakwindow.R R/reformat_eucast.R R/turnpoints.R R/unbin.R R/unimix-distributions-internal.R R/unimix-methods.R R/utilities-internal.R R/weighted.sd.R R/zd_main_components.R README.md

_pkgdown.yml

antibioticR.Rproj

data/micdata.txt

docs/404.html

docs/LICENSE-text.html

docs/articles/Introduction.html

docs/articles/Introduction_files/figure-html/unnamed-chunk-10-1.png

docs/articles/Introduction_files/figure-html/unnamed-chunk-11-1.png

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docs/articles/Introduction_files/header-attrs-2.11/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/ECOFFinder.html

docs/reference/Rplot001.png

docs/reference/Rplot002.png

docs/reference/Rplot003.png

docs/reference/abr_baseclass.html

docs/reference/abr_densfunctions-1.png

docs/reference/abr_densfunctions-2.png

docs/reference/abr_densfunctions-3.png

docs/reference/abr_densfunctions.html

docs/reference/abr_methods.html

docs/reference/abr_quantile.html

docs/reference/abr_summary.html

docs/reference/antibioticR-internal.html

docs/reference/antibioticR-package.html

docs/reference/ecoffinder_nls-1.png

docs/reference/ecoffinder_nls-2.png

docs/reference/ecoffinder_nls-3.png

docs/reference/ecoffinder_nls.html

docs/reference/ecoffinder_startpar-1.png

docs/reference/ecoffinder_startpar-2.png

docs/reference/ecoffinder_startpar.html

docs/reference/fit_unimix.html

docs/reference/index.html

docs/reference/micdata-1.png

docs/reference/micdata-2.png

docs/reference/micdata.html

docs/reference/mixParmDf2parmlist.html

docs/reference/mx-diagnostics.html

docs/reference/mxMle-class.html

docs/reference/mxObj-class.html

docs/reference/mxObj-coerce.html

docs/reference/mxObj-methods.html

docs/reference/mx_compare.html

docs/reference/mx_guess_components-1.png

docs/reference/mx_guess_components.html

docs/reference/mx_metafit.html

docs/reference/mx_parmlist_sort.html

docs/reference/mx_plot-1.png

docs/reference/mx_plot.html

docs/reference/mx_results.html

docs/reference/nls-class.html

docs/reference/parmList.html

docs/reference/peakwindow-1.png

docs/reference/peakwindow-2.png

docs/reference/peakwindow.html

docs/reference/plot-abr_ecoffinder-ANY-method.html

docs/reference/reformat_eucast.html

docs/reference/turnpoints.html

docs/reference/unbin.html

docs/reference/unimix.html

docs/reference/weighted.sd.html

docs/reference/zd_main_components-1.png

docs/reference/zd_main_components.html

inst/ECOFFinder/info.html

inst/ECOFFinder/server.R inst/ECOFFinder/ui.R man/ECOFFinder.Rd man/abr_baseclass.Rd man/abr_densfunctions.Rd man/abr_methods.Rd man/abr_quantile.Rd man/abr_summary.Rd man/antibioticR-internal.Rd man/antibioticR-package.Rd man/ecoffinder_nls.Rd man/ecoffinder_startpar.Rd man/fit_unimix.Rd man/micdata.Rd man/mixParmDf2parmlist.Rd man/mx-diagnostics.Rd man/mxMle-class.Rd man/mxObj-class.Rd man/mxObj-coerce.Rd man/mxObj-methods.Rd man/mx_compare.Rd man/mx_guess_components.Rd man/mx_metafit.Rd man/mx_parmlist_sort.Rd man/mx_plot.Rd man/mx_results.Rd man/nls-class.Rd man/parmList.Rd man/peakwindow.Rd man/plot-abr_ecoffinder-ANY-method.Rd man/reformat_eucast.Rd man/turnpoints.Rd man/unbin.Rd man/unimix.Rd man/weighted.sd.Rd man/zd_main_components.Rd vignettes/Introduction.R vignettes/Introduction.Rmd

vignettes/Introduction.html

vignettes/antibioticR.bib

tpetzoldt/antibioticR documentation built on Sept. 25, 2021, 1:17 p.m.