Tools for GWAS analysis

Global functions | |
---|---|

BHfdr | Source code |

Ffromdev | Source code |

HWE.chisq | Source code |

HWE.chisq.matrix | Source code |

QC | Source code |

RandomImputeByColumn | Source code |

clump | Source code |

cond.repglm | Source code |

corr.lag | Source code |

corrlattice | Source code |

corrlattice.slide | Source code |

find.in.vcf | Source code |

hello | Man page |

liftover | Source code |

locuszoom | Source code |

lrt.repglm | Source code |

match.col | Source code |

matchpos | Source code |

p2z | Source code |

pandcoefs | Source code |

parse.options | Source code |

pfromdev | Source code |

plot.qqplot_pvals | Source code |

pruneSNP | Source code |

pruneSNP.kernal | Source code |

qqplot_pvals | Source code |

qqplot_pvals2 | Source code |

r2t | Source code |

remove_to | Source code |

repglm | Source code |

repglm.lrt | Source code |

repglm.wrapper | Source code |

running.corr | Source code |

selectColBySNP | Source code |

splitgenome | Source code |

std.chr | Source code |

svdpcomppred | Source code |

t2r | Source code |

trim.trailing.bases | Source code |

within.range | Source code |

z2p | Source code |

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