Files in tuv292/abx_idx
Modeling the Susceptibility of a Bacterial Community to Antibiotics
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/.DS_Store
R/abx_index.R
R/data.R
R/match.R
R/predict.R
R/susceptibility.R
README.Rmd
README.md
appveyor.yml
codecov.yml
data-raw/.DS_Store
data-raw/Lactobacillus_data.csv
data-raw/example_data.Rmd
data-raw/genera_0831.txt
data-raw/phenotype_misc.csv
data-raw/species_0831.txt
data-raw/susceptibility_misc.csv
data-raw/taxon_phenotypes.Rmd
data-raw/taxon_susceptibility.Rmd
data-raw/weiss2021_data.csv
data/.DS_Store
data/taxon_phenotypes.rda
data/taxon_susceptibility.rda
data/weiss2021_data.rda
man/antibiotic_specific_susceptibility.Rd
man/antibiotic_susceptibility.Rd
man/mirix.Rd
man/mirix_antibiotic.Rd
man/phenotype_susceptibility.Rd
man/predict_abundance.Rd
man/taxon_phenotypes.Rd
man/taxon_susceptibility.Rd
man/weiss2021_data.Rd
mirix.Rproj
tests/testthat.R
tests/testthat/Rplots.pdf
tests/testthat/test-abx_index.R
tests/testthat/test-match.R
tests/testthat/test-predict.R
tests/testthat/test-susceptibility.R
tools/readme/weiss_healthy6-1.png
tools/readme/weiss_healthy6_prediction-1.png
tools/readme/weiss_vancomycin_index-1.png
