sig_count_snv: Count SNV Contexts

Description Usage Arguments Value

View source: R/mutationalpatterns.R

Description

Counts SNV Contexts.

Usage

1
sig_count_snv(vcf_gr, ref_genome)

Arguments

vcf_gr

GRanges containing all mutation types from a single sample.

ref_genome

The BSGenome reference genome to use.

Value

A list with two elements:


umccr/gpgr documentation built on Nov. 25, 2021, 1:15 p.m.