wstripchart_list: wstripchart_list

In vertesy/MarkdownReports.v2.9.5: LEGACY VERSION - Generate Scientific Figures and Reports Easily

Description

Create and save stripcharts from a list as .pdf, in "OutDir". This version allows individual coloring of each data point, by a color-list of the same dimension. If mdlink =T, it inserts a .pdf and a .png link in the markdown report, set by "path_of_report". The .png version is not created, only the link is put in place, not to overwrite previous versions.

Usage

wstripchart_list(yalist, ..., border = 1, bxpcol = 0, pch = 18,
  pchlwd = 1, pchcex = 1.5, bg = "chartreuse2", coll = "black",
  metod = "jitter", jitter = 0.2,
  plotname = as.character(substitute(yalist)), sub = NULL, ylb = "",
  xlab = "", incrBottMarginBy = 0, tilted_text = F,
  savefile = UnlessSpec("b.save.wplots"), w = UnlessSpec("b.defSize", 7),
  h = w, mdlink = ww.set.mdlink())

Arguments

yalist	Input list to be plotted.
...	Pass any other parameter of the corresponding plotting function (most of them should work).
border	An optional vector of colors for the outlines of the boxplots. The values in border are recycled if the length of border is less than the number of plots.
bxpcol	Color of the boxplot outlines.
pch	Define the symbol for each data point. A number [0-25] or any string between ""-s.
pchlwd	Define the outline width of the symbol for each data point.
pchcex	Define the size of the symbol for each data point.
bg	Background color.
metod	Method for displaying data points to avoid overlap; either"jitter" or "stack". See stripchart().
jitter	The amount of horizontal scatter added to the individual data points (to avoid overlaps).
plotname	Title of the plot (main parameter) and also the name of the file.
sub	Subtitle below the plot.
ylb	Y-axis label.
incrBottMarginBy	Increase the blank space at the bottom of the plot. Use if labels do not fit on the plot.
tilted_text	Use 45 degree x-labels if TRUE. Useful for long, but not too many labels.
savefile	Save plot as pdf in OutDir, TRUE by default.
w	Width of the saved pdf image, in inches.
h	Height of the saved pdf image, in inches.
mdlink	Insert a .pdf and a .png image link in the markdown report, set by "path_of_report".
xlb	X-axis label.
col	Color of the plot.l

Examples

wstripchart_list (yalist =  , ... =  , plotname = as.character(substitute(yalist)), sub = FALSE, ylb = NULL, xlab = NULL, border = 1, bxpcol = 0, pch = 23, pchlwd = 1, pchcex = 1.5, bg = chartreuse2, coll = black, metod = jitter, jitter = 0.2, w = 7, h = w, incrBottMarginBy = 0, tilted_text = F, mdlink = F)

vertesy/MarkdownReports.v2.9.5 documentation built on May 22, 2019, 4 p.m.