API for vincent-dk/epiG
Statistical Inference of Epi-Allelic Patterns from Whole-Genome Bisulphite Sequencing Data

Global functions
BSeq Man page Source code
NOMeSeq Man page Source code
auto_config Man page Source code
chain_info Man page Source code
create_BS_model Source code
end.epiG Man page Source code
epiG Man page Source code
epiG_chunks Man page Source code
epiG_config Man page Source code
fetch_alt Man page Source code
fetch_read_info Man page Source code
fetch_reads Man page Source code
fetch_ref Man page Source code
file_info Man page Source code
fit Man page
genotype Source code
header_info Man page Source code
length.epiG Man page Source code
load_reads Man page Source code
locate_C Man page Source code
locate_CG Man page Source code
locate_DGCH Man page Source code
locate_GC Man page Source code
locate_HCGD Man page Source code
locate_mismatch Man page Source code
loglike Source code
methylation.status Source code
nchain Man page Source code
nchunks Man page Source code
nread Man page Source code
position_info Man page Source code
print.epiG Man page Source code
print.epiG.config Man page Source code
print.epiG.model Man page Source code
print.epiG.reads Man page Source code
ratio Source code
read_count Man page Source code
read_depth Man page Source code
read_fasta Man page Source code Source code
read_info Man page Source code
read_info.epiG Man page Source code
read_info.epiG_reads Man page Source code
set_run_configuration Man page Source code
sparseMatrix_from_C_format Man page Source code
sparseMatrix_to_C_format Man page Source code
start.epiG Man page Source code
subregion Man page Source code
symbols Source code
test_rtools Man page Source code
vector_search Man page Source code
vincent-dk/epiG documentation built on May 27, 2017, 8:53 p.m.