readsR-methods: readsR methods

Description Usage Arguments Value See Also Examples

Description

readsR returns a list of the backward aligned reads

readsR<- assisgn a list of forward reads to a reads object

Usage

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readsR(object)

readsR(object) <- value

## S4 method for signature 'reads'
readsR(object)

## S4 replacement method for signature 'reads,list'
readsR(object) <- value

Arguments

object

A reads object

value

A list of data.table with same format as a GenomicRanges object with an additional match column

Value

A list of data.table with same format as a GenomicRanges object with an additional match column

A reads object with modified backward reads

See Also

reads-class

Examples

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file <- system.file("extdata","example",
  "encode_K562_Ctcf_first3chr_Rep1.sort.bam",package = "ChIPUtils")
rr <- create_reads(file)
readsR(rr)

welch16/ChIPUtils documentation built on May 28, 2017, 2:03 a.m.