NEWS.md

In wilkox/gggenes: Draw Gene Arrow Maps in 'ggplot2'

gggenes (development version)

Major changes

• Add new geom_terminator() and geom_terminator_label()
• Add support for polar coordinates

Minor changes

• Deprecate the size aesthetic in favour of linewidth (size deprecated as of ggplot2 3.4.0)
• Use the cli package for messages, warnings etc.

gggenes 0.5.1

Minor changes

• Fix the 'ggfittext-package' documentation after a breaking change to roxygen2

gggenes 0.5.0

Major changes

• Add new geom_feature() and geom_feature_label()
• Add support for flipped coordinates with coord_flip() (#38)

Minor changes

• Explicit coercion of the forward value to logical, more useful values for the forward aesthetic in example data, and fix an error in README and introductory vignette (-1 does not coerce to FALSE...)
• Improve handling of NA id values in make_alignment_dummies() (#51, thanks @NanamiKubota)
• Update element_line to use linewidth rather than size (size deprecated as of ggplot2 3.4.0)

Bug fixes

• Fix bug where height argument to geom_gene_label() and geom_subgene_label() were being ignored (#40, thanks @jvanbelzen)

gggenes 0.4.1

Minor changes

• More useful example for the forward aesthetic in the README and example_genes (thanks @rickbeeloo)

Bug fixes

• Fix bug in checking position of subgenes relative to the parent gene (#21, thanks @mchiapello)
• Add 'orientation' column to example_subgenes and correct some errors in the documentation for both example data frames
• Make vdiffr tests conditional

gggenes 0.4.0

Major changes

• Add new geom_subgene_arrow() (contributed by @zdk123)
• Add new geom_subgene_label()
• Support new version of ggfittext (0.8.0)

Bug fixes

• Fix failing visual tests
• Fix space in figure file name
• Replace expect_error with the more reliable expect_silent in tests
• Fix bugs in several tests
• Add visual testing with vdiffr
• Misc. small bug fixes and typo corrections
• Fix compatibility with tidyeval changes in ggplot2 v2.3.0

gggenes 0.3.1

Bug fixes

• Now actually compatible with ggplot2 v2.3.0

gggenes 0.3.0

Major changes

• geom_gene_arrow() now supports forward aesthetic (#3 and #5, thanks @adomingues and @jasonserviss)
• geom_gene_label() added (#3, thanks @adomingues)
• Compatible with ggplot2 v2.3.0

Minor changes

• Change R version dependency to fix 'patchlevel' error on CMD check
• Add support for both pre- and post- ggplot2 v2.3.0 versions of aes()
• Edit docs and README

Bug fixes

• Remove README.html so GitHub renders README correctly

gggenes 0.2.0

Major changes

• Remove 'dplyr' dependency
• Update documentation
• Add vignette

Bug fixes

• Fix drawing of geom_gene_arrow()

wilkox/gggenes documentation built on Sept. 28, 2023, 6:27 p.m.