README.md

In xgaoo/ClusterMap:

ClusterMap

ClusterMap is an R package designed to analyze and compare two or more single cell expression datasets.

Please cite: Gao X, Hu D, Gogol M, Li H. ClusterMap: Compare multiple Single Cell RNA-Seq datasets across different experimental conditions. Bioinformatics. 2019. doi: 10.1093/bioinformatics/btz024.

Installation

R(>=3.4.3), Seurat(>= 2.2.1),pheatmap(>= 1.0.10),ape(>= 5.1),circlize(>= 0.4.3)

install_github('devtools')  
library('devtools')  
install_github("xgaoo/ClusterMap")
library('ClusterMap')  

Tutorial

https://xgaoo.github.io/ClusterMap/ClusterMap.html

xgaoo/ClusterMap documentation built on Oct. 9, 2021, 5:31 a.m.