Files in yufree/pmd
Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis and Reactomics Analysis
.Rbuildignore
.github/workflows/pkgdown.yml
.github/workflows/r.yml
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md
R/data.R
R/globalstd.R
R/pmdanno.R
R/pmdda.R
R/pmdvis.R
R/sda.R
R/shiny.R
R/sysdata.rda
README.md
_pkgdown.yaml
data/MaConDa.rda
data/hmdb.rda
data/keggrall.rda
data/omics.rda
data/sda.rda
data/spmeinvivo.rda
docs/404.html
docs/articles/globalstd.html
docs/articles/globalstd_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/globalstd_files/anchor-sections-1.0/anchor-sections.css
docs/articles/globalstd_files/anchor-sections-1.0/anchor-sections.js
docs/articles/globalstd_files/figure-html/all-1.png
docs/articles/globalstd_files/figure-html/comp-1.png
docs/articles/globalstd_files/figure-html/corcomp-1.png
docs/articles/globalstd_files/figure-html/corpeak-1.png
docs/articles/globalstd_files/figure-html/globalcor-1.png
docs/articles/globalstd_files/figure-html/net-1.png
docs/articles/globalstd_files/figure-html/net-2.png
docs/articles/globalstd_files/figure-html/net-3.png
docs/articles/globalstd_files/figure-html/pca-1.png
docs/articles/globalstd_files/figure-html/pmd-1.png
docs/articles/globalstd_files/figure-html/pmdindex-1.png
docs/articles/globalstd_files/figure-html/pmdindex-10.png
docs/articles/globalstd_files/figure-html/pmdindex-2.png
docs/articles/globalstd_files/figure-html/pmdindex-3.png
docs/articles/globalstd_files/figure-html/pmdindex-4.png
docs/articles/globalstd_files/figure-html/pmdindex-5.png
docs/articles/globalstd_files/figure-html/pmdindex-6.png
docs/articles/globalstd_files/figure-html/pmdindex-7.png
docs/articles/globalstd_files/figure-html/pmdindex-8.png
docs/articles/globalstd_files/figure-html/pmdindex-9.png
docs/articles/globalstd_files/figure-html/rtg-1.png
docs/articles/globalstd_files/figure-html/stdplot-1.png
docs/articles/globalstd_files/figure-html/stdrtplot-1.png
docs/articles/globalstd_files/figure-html/stdsda-1.png
docs/articles/globalstd_files/figure-html/stdsdaidx-1.png
docs/articles/globalstd_files/figure-html/stdsdaidx-2.png
docs/articles/globalstd_files/figure-html/tarnet-1.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-1.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-10.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-11.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-12.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-13.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-14.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-15.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-16.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-17.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-18.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-19.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-2.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-3.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-4.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-5.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-6.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-7.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-8.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-2-9.png
docs/articles/globalstd_files/figure-html/unnamed-chunk-3-1.png
docs/articles/index.html
docs/articles/reactomics.html
docs/articles/reactomics_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/reactomics_files/anchor-sections-1.0/anchor-sections.css
docs/articles/reactomics_files/anchor-sections-1.0/anchor-sections.js
docs/articles/reactomics_files/figure-html/cda-1.png
docs/articles/reactomics_files/figure-html/net-1.png
docs/articles/reactomics_files/figure-html/net-2.png
docs/articles/reactomics_files/figure-html/net-3.png
docs/articles/reactomics_files/figure-html/nwa-1.png
docs/articles/reactomics_files/figure-html/tarnet-1.png
docs/articles/reactomics_files/figure-html/tarnet-2.png
docs/articles/reactomics_files/figure-html/unnamed-chunk-4-1.png
docs/articles/reactomics_files/figure-html/unnamed-chunk-5-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/getcda.html
docs/reference/getchain.html
docs/reference/getcluster.html
docs/reference/getcorcluster.html
docs/reference/getmass.html
docs/reference/getms2pmd.html
docs/reference/getmspmd.html
docs/reference/getpaired.html
docs/reference/getpmd.html
docs/reference/getposneg.html
docs/reference/getrda.html
docs/reference/getreact.html
docs/reference/getsda.html
docs/reference/getstd.html
docs/reference/gettarget.html
docs/reference/globalstd.html
docs/reference/hmdb.html
docs/reference/hmdbp.html
docs/reference/index.html
docs/reference/keggrall.html
docs/reference/omics.html
docs/reference/orb.html
docs/reference/pcasf.html
docs/reference/plotcn-1.png
docs/reference/plotcn.html
docs/reference/plotpaired-1.png
docs/reference/plotpaired.html
docs/reference/plotpmdanno-1.png
docs/reference/plotpmdanno-2.png
docs/reference/plotpmdanno-3.png
docs/reference/plotpmdanno.html
docs/reference/plotrtg-1.png
docs/reference/plotrtg.html
docs/reference/plotsda-1.png
docs/reference/plotsda.html
docs/reference/plotstd-1.png
docs/reference/plotstd.html
docs/reference/plotstdrt-1.png
docs/reference/plotstdrt.html
docs/reference/plotstdsda-1.png
docs/reference/plotstdsda.html
docs/reference/pmdanno.html
docs/reference/qqq.html
docs/reference/qtof.html
docs/reference/runPMD.html
docs/reference/runPMDnet.html
docs/reference/sda.html
docs/reference/spmeinvivo.html
inst/CITATION
inst/shinyapp/pmd.Rmd
inst/shinyapp/pmdnet.Rmd
man/MaConDa.Rd
man/getcda.Rd
man/getchain.Rd
man/getcluster.Rd
man/getcorcluster.Rd
man/getms2pmd.Rd
man/getmspmd.Rd
man/getpaired.Rd
man/getpmd.Rd
man/getposneg.Rd
man/getrda.Rd
man/getreact.Rd
man/getsda.Rd
man/getstd.Rd
man/gettarget.Rd
man/globalstd.Rd
man/hmdb.Rd
man/keggrall.Rd
man/omics.Rd
man/pcasf.Rd
man/plotcn.Rd
man/plotpaired.Rd
man/plotrtg.Rd
man/plotsda.Rd
man/plotstd.Rd
man/plotstdrt.Rd
man/plotstdsda.Rd
man/pmdanno.Rd
man/runPMD.Rd
man/runPMDnet.Rd
man/sda.Rd
man/spmeinvivo.Rd
pmd.Rproj
vignettes/globalstd.Rmd
vignettes/reactomics.Rmd
