zhengxwen/SeqArray: Data Management of Large-Scale Whole-Genome Sequence Variant Calls

Data management of large-scale whole-genome sequencing variant calls with thousands of individuals: genotypic data (e.g., SNVs, indels and structural variation calls) and annotations in SeqArray GDS files are stored in an array-oriented and compressed manner, with efficient data access using the R programming language.

Getting started

Package details

Bioconductor views DataRepresentation Genetics Infrastructure Sequencing
Maintainer
LicenseGPL-3
Version1.43.5
URL https://github.com/zhengxwen/SeqArray
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("zhengxwen/SeqArray")
zhengxwen/SeqArray documentation built on April 11, 2024, 3:20 a.m.