Single Continuous Surrogate Analysis

aqForm | Asymmetric Quadratic Form |

coef.som | Extract Coefficients from Surrogate Outcome Model |

D.s | Surrogate Design Matrix |

D.t | Target Design Matrix |

fastInv | Fast Matrix Inverse |

fastIP | Fast Matrix Inner Product |

fastT | Fast Matrix Transpose |

fit.scs | Fit Model, Single Continuous Surrogate |

GS | Simulated Genotypes |

Infoscs | Information Matrix |

NewtonD | Newton Delta |

partInfo | Partition Information Matrix |

print.som | Print for Surrogate Outcome Model |

qForm | Quadratic Form |

residuals.som | Extract Residuals from Surrogate Outcome Model |

rScore.scs | Repeated Score Test, Single Continuous Surrogate |

SchurC | Schur complement |

ScoreAscs | Profile Score for Alpha |

Score.scs | Score Test, Single Continuous Surrogate |

ScoreStatscs | Score Statistic |

som-class | Surrogate Outcome Model |

som-method | Show for Surrogate Outcome Model |

toProper | Convert to proper case |

vcov.som | Extract Covariance Matrix from Surrogate Outcome Model |

Wald.scs | Wald Test, Single Continuous Surrogate |

Y | Phenotype Matrix |

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