sim.plot.zoom.in: Zoom in on heatmap

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/sim.plot.zscore.heatmap.R

Description

Zoom in on pervious produced heatmap by sim.plot.zscore.heatmap

Usage

1

Arguments

call

language, function call of sim.plot.zscore.heatmap

Details

sim.plot.zscore.heatmap returns (invisible) the function call and as attribute the local function environment. So by adjusting the the xlim and ylim a zoom in is created.

Value

an additional plot is created, on the previous plot a rectangle indicating the zoomed region.

Author(s)

Marten Boetzer, Melle Sieswerda, Renee X. de Menezes R.X.Menezes@lumc.nl

See Also

SIM, sim.plot.zscore.heatmap

Examples

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#first run example(assemble.data)
#and example(integrated.analysis)

#plot the zscores in a heatmap
sim.plot <- sim.plot.zscore.heatmap(input.regions = "8q",  
                                    adjust.method = "BY", 
                                    run.name = "chr8q", pdf = FALSE)
#only when runned interactive
if(interactive())
	sim.plot.zoom.in(sim.plot)

SIM documentation built on Nov. 8, 2020, 4:58 p.m.