removeRegion: removeRegion
In SPLINTER: Splice Interpreter of Transcripts
Description
Usage
Arguments
Value
Author(s)
View source: R/main_splinter.R
Description
removes a region (exon) from a GRanges or GRangesList
Usage
1
removeRegion(subject, roi)
Arguments
subject
GRanges or GrangesList object
roi
makeROI object containing GRanges range (to remove)
Value
GRanges object
Author(s)
Diana Low
# Removes the exon defined in roi GRanges object from a GRanges/GRangesList
compatible_cds$hits[[1]]
region_minus_exon<-removeRegion(compatible_cds$hits[[1]],roi)
SPLINTER documentation built on Nov. 8, 2020, 8:13 p.m.
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Description Usage Arguments Value Author(s)
View source: R/main_splinter.R
Description
removes a region (exon) from a GRanges or GRangesList
Usage
1 | removeRegion(subject, roi)
|
Arguments
subject |
GRanges or GrangesList object |
roi |
|
Value
GRanges object
Author(s)
Diana Low
# Removes the exon defined in roi GRanges object from a GRanges/GRangesList compatible_cds$hits[[1]] region_minus_exon<-removeRegion(compatible_cds$hits[[1]],roi)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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