get_pct_var_exp_svd: Compute percent of variance explained
In corral: Correspondence Analysis for Single Cell Data

Description Usage Arguments Value Examples

Compute percent of variance explained

1	get_pct_var_exp_svd(thissvd, preproc_mat = thissvd$d)

`thissvd`	list outputted from an svd function (svd, irlba; can also take output from `corral_mat` and `corralm_matlist`)
`preproc_mat`	matrix of pre-processed values (optional) - important to include if the svd is only partial as this is used to compute the sum of eigenvalues

vector of percent variance explained values, indexed by PC

mat <- matrix(sample(seq(0,20,1),100,replace = TRUE),nrow = 10)
my_svd <- svd(mat)
get_pct_var_exp_svd(my_svd) # this works if my_svd is a full svd
my_irl <- irlba::irlba(mat,nv = 2)
get_pct_var_exp_svd(my_irl, preproc_mat = mat) # ... otherwise use this