Man pages for epiR
Tools for the Analysis of Epidemiological Data

epi.2by2Summary measures for count data presented in a 2 by 2 table
epi.aboutThe library epiR: summary information
epi.ascWrite matrix to an ASCII raster file
epi.betabusterAn R version of Wes Johnson and Chun-Lung Su's Betabuster
epi.blcm.parasNumber of parameters to be inferred and number of informative...
epi.bohningBohning's test for overdispersion of Poisson data
epi.cccConcordance correlation coefficient
epi.confConfidence intervals for means, proportions, incidence, and...
epi.convgridConvert British National Grid georeferences to easting and...
epi.cpExtract unique covariate patterns from a data set
epi.cpresidsCovariate pattern residuals from a logistic regression model
epi.descriptivesDescriptive statistics
epi.dgammaEstimate the precision of a [structured] heterogeneity term
epi.directadjDirectly adjusted incidence rate estimates
epi.dmsDecimal degrees and degrees, minutes and seconds conversion
epi.dslMixed-effects meta-analysis of binary outcomes using the...
epi.edrEstimated dissemination ratio
epi.empbayesEmpirical Bayes estimates of observed event counts
epi.epiduralRates of use of epidural anaesthesia in trials of caregiver...
epi.herdtestEstimate the characteristics of diagnostic tests applied at...
epi.incinLaryngeal and lung cancer cases in Lancashire 1974 - 1983
epi.indirectadjIndirectly adjusted incidence risk estimates
epi.insthazEvent instantaneous hazard based on Kaplan-Meier survival...
epi.interactionRelative excess risk due to interaction in a case-control...
epi.ivFixed-effects meta-analysis of binary outcomes using the...
epi.kappaKappa statistic
epi.ltdLactation to date and standard lactation milk yields
epi.mhFixed-effects meta-analysis of binary outcomes using the...
epi.nomogramPost-test probability of disease given sensitivity and...
epi.occcOverall concordance correlation coefficient (OCCC)
epi.offsetCreate offset vector
epi.pooledEstimate herd test characteristics when pooled sampling is...
epi.popsizeEstimate population size on the basis of capture-recapture...
epi.prccPartial rank correlation coefficients
epi.prevEstimate true prevalence and the expected number of false...
epi.psiProportional similarity index
epi.realriskAn R version of the Winton Centre's RealRisk calculator
epi.RtoBUGSR to WinBUGS data conversion
epi.SClipLip cancer in Scotland 1975 - 1980
epi.smdFixed-effects meta-analysis of continuous outcomes using the...
epi.smrConfidence intervals and tests of significance of the...
epi.ssccSample size, power or minimum detectable odds ratio for an...
epi.ssclus1estbSample size to estimate a binary outcome using one-stage...
epi.ssclus1estcSample size to estimate a continuous outcome using one-stage...
epi.ssclus2estbNumber of clusters to be sampled to estimate a binary outcome...
epi.ssclus2estcNumber of clusters to be sampled to estimate a continuous...
epi.sscohortcSample size, power or minimum detectable incidence risk ratio...
epi.sscohorttSample size, power or minimum detectable incidence rate ratio...
epi.sscompbSample size and power when comparing binary outcomes
epi.sscompcSample size and power when comparing continuous outcomes
epi.sscompsSample size and power when comparing time to event
epi.ssdetectSample size to detect an event
epi.ssdxsespSample size to estimate the sensitivity or specificity of a...
epi.ssdxtestSample size to validate a diagnostic test in the absence of a...
epi.ssequbSample size for a parallel equivalence or equality trial,...
epi.ssequcSample size for a parallel equivalence or equality trial,...
epi.ssninfbSample size for a non-inferiority trial, binary outcome
epi.ssninfcSample size for a non-inferiority trial, continuous outcome
epi.sssimpleestbSample size to estimate a binary outcome using simple random...
epi.sssimpleestcSample size to estimate a continuous outcome using simple...
epi.ssstrataestbSample size to estimate a binary outcome using stratified...
epi.ssstrataestcSample size to estimate a continuous outcome using a...
epi.sssupbSample size for a parallel superiority trial, binary outcome
epi.sssupcSample size for a parallel superiority trial, continuous...
epi.ssxsectnSample size, power or minimum detectable prevalence ratio or...
epi.testsSensitivity, specificity and predictive value of a diagnostic...
rsu.adjriskAdjusted risk values
rsu.dxtestSensitivity and specificity of diagnostic tests interpreted...
rsu.epinfEffective probability of disease
rsu.pfree.equEquilibrium probability of disease freedom assuming...
rsu.pfree.rsCalculate the probability of freedom for given population...
rsu.pstarDesign prevalence back calculation
rsu.sepProbability that the prevalence of disease in a population is...
rsu.sep.censSurveillance system sensitivity assuming data from a...
rsu.sep.passSurveillance system sensitivity assuming passive surveillance...
rsu.sep.rbSurveillance system sensitivity assuming risk-based sampling...
rsu.sep.rb1rfSurveillance system sensitivity assuming risk-based sampling...
rsu.sep.rb2rfSurveillance system sensitivity assuming risk-based sampling...
rsu.sep.rb2stSurveillance system sensitivity assuming risk based,...
rsu.sep.rbvarseSurveillance system sensitivity assuming risk based sampling...
rsu.sep.rsSurveillance system sensitivity assuming representative...
rsu.sep.rs2stSurveillance system sensitivity assuming representative...
rsu.sep.rsfreecalcSurveillance system sensitivity for detection of disease...
rsu.sep.rsmultSurveillance system sensitivity by combining multiple...
rsu.sep.rspoolSurveillance system sensitivity assuming representative...
rsu.sep.rsvarseSurveillance system sensitivity assuming representative...
rsu.spp.rsSurveillance system specificity assuming representative...
rsu.sspfree.rsSample size to achieve a desired probability of disease...
rsu.sssep.rb2st1rfSample size to achieve a desired surveillance system...
rsu.sssep.rb2st2rfSample size to achieve a desired surveillance system...
rsu.sssep.rbmrgSample size to achieve a desired surveillance system...
rsu.sssep.rbsrgSample size to achieve a desired surveillance system...
rsu.sssep.rsSample size to achieve a desired surveillance system...
rsu.sssep.rs2stSample size to achieve a desired surveillance system...
rsu.sssep.rsfreecalcSample size to achieve a desired surveillance system...
rsu.sssep.rspoolSample size to achieve a desired surveillance system...
epiR documentation built on Nov. 20, 2023, 9:06 a.m.