andrea-poletti-unibo/BOBaFIT: Refitting diploid region profiles using a clustering procedure

This package provides a method to refit and correct the diploid region in copy number profiles. It uses a clustering algorithm to identify pathology-specific normal (diploid) chromosomes and then use their copy number signal to refit the whole profile. The package is composed by three functions: DRrefit (the main function), ComputeNormalChromosome and PlotCluster.

Getting started

Package details

Bioconductor views Clustering CopyNumberVariation Normalization Software Visualization
Maintainer
LicenseGPL (>= 3)
Version1.0.1
URL https://github.com/andrea-poletti-unibo/BOBaFIT
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("andrea-poletti-unibo/BOBaFIT")
andrea-poletti-unibo/BOBaFIT documentation built on Jan. 29, 2024, 7:23 a.m.