Genesets-loadGo: Creates a GeneSetCollection object using the Gene Ontology...

Description Usage Arguments Value See Also Examples

Description

loadGo creates a GeneSetCollection object from the data present at the Gene Ontology data base (org.Hs.eg.db R package).

Usage

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loadGo(ontology)

## S4 method for signature 'character'
loadGo(ontology)

Arguments

ontology

character indicating which ontology must be loaded. Must be one of BP, MF or CC.

Value

A GeneSetCollection object (Genes are with their EntrezGene ID).

See Also

as.Genesets

Genesets-enrichr

geneSetsFromFile

Examples

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## Lets load the Cellular Components gene sets from the Gene Ontology.
ccGSets <- loadGo("CC")

jcrodriguez1989/MIGSA documentation built on Nov. 1, 2020, 8:04 a.m.