plotFragLen: Plot fragment length distribution over samples

In mikelove/alpine: alpine

Plot fragment length distribution over samples

Description

Plots the fragment length distribution.

Usage

plotFragLen(fitpar, col, lty)

Arguments

fitpar	a list of the output of fitBiasModels over samples
col	a vector of colors
lty	a vector of line types

Value

plot

Examples

# fitpar was fit using identical code
# as found in the vignette, except with
# 25 genes, and with fragment size in 80-350 bp
data(preprocessedData)
perf <- rep(1:2, each=2)
plotFragLen(fitpar, col=perf)

mikelove/alpine documentation built on May 14, 2024, 5:28 p.m.