Files in sebastian-gregoricchio/Rseb
An R-package for NGS data managing and visualization
.github/workflows/workflow.yml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md/LICENSE.md
Meta/vignette.rds
NAMESPACE
NEWS.md
R/DE.status.R
R/GSEA.to.GOnumber.R
R/IGVsnap.R
R/actualize.R
R/build.bed.R
R/calculate.mode.R
R/closest.regions.R
R/cmyk.R
R/collapse.bed.R
R/color.gradient.R
R/combine.lists.R
R/computeMatrix.deeptools.R
R/convert_sequence.R
R/data.R
R/data.frame.to.list.R
R/data.summary.R
R/density.matrix.R
R/density_plot.R
R/doughnut.R
R/evaluate.heterogeneity.R
R/floating.ceiling.R
R/floating.floor.R
R/genomic.tracks.R
R/get.gene.name.R
R/get.single.base.score.bw.R
R/grepl.data.frame.R
R/incucyte.R
R/install.pkg.source.R
R/intersect.bedtools.R
R/intersect.regions.R
R/is.color.R
R/is.nan_df.R
R/mass.to.volume.R
R/molarity.to.mass.R
R/move.df.col.R
R/multi.bigwig.mean.R
R/pStars.R
R/pkg.check.R
R/pkg.version.R
R/plot.NES.R
R/plot.density.differences.R
R/plot.density.profile.R
R/plot.density.profile.smooth.R
R/plot.density.summary.R
R/plot.gsea.R
R/plot.multi.gsea.R
R/qPCR.rna.exp.R
R/qPCR.rna.mean.reps.R
R/read.computeMatrix.file.R
R/reorder.samples.computeMatrix.R
R/restore_packages.R
R/restriction.sites.to.bed.R
R/sort.bed.R
R/store_packages.R
R/substract.bw.R
R/uniform.x.axis.R
R/uniform.y.axis.R
R/update_pkgs.R
R/venn.overlap.R
R/volcano.R
README.md
Rseb_logo.svg
Rseb_manual.pdf
_config.yml
citation.cff
codecov.yml
data/CNV.data.rda
data/RNAseq.rda
data/collapse.bed.Rd
data/deeptools.matrix.Rd
data/deeptools.matrix.rda
data/density.matrix.Rd
data/doughnut.Rd
data/genomic.tracks.Rd
data/get.single.base.score.bw.Rd
data/mydataset.R
data/plot.density.differences.Rd
data/plot.density.profile.Rd
data/plot.density.profile.smooth.Rd
data/plot.density.summary.Rd
data/qPCR.results.rep1.Rd
data/qPCR.results.rep1.rda
data/qPCR.results.rep2.Rd
data/qPCR.results.rep2.rda
data/qPCR.rna.exp.Rd
data/qPCR.rna.mean.reps.Rd
data/sort.bed.Rd
doc/Rseb.overview.vignette.R
doc/Rseb.overview.vignette.Rmd
doc/Rseb.overview.vignette.html
google3df19f59a8f3f839.html
index.md
inst/CITATION
inst/extdata/RNAseq_data.tsv
inst/extdata/matrix.deepTools.rds
inst/extdata/qPCR_results_rep1.rds
inst/extdata/qPCR_results_rep2.rds
man/CNV.data.Rd
man/DE.status.Rd
man/GSEA.to.GOnumber.Rd
man/IGVsnap.Rd
man/RNAseq.Rd
man/actualize.Rd
man/build.bed.Rd
man/calculate.mode.Rd
man/closest.regions.Rd
man/cmyk.Rd
man/collapse.bed.Rd
man/color.gradient.Rd
man/combine.lists.Rd
man/computeMatrix.deeptools.Rd
man/convert_sequence.Rd
man/data.frame.to.list.Rd
man/data.summary.Rd
man/deeptools.matrix.Rd
man/density.matrix.Rd
man/density_plot.Rd
man/doughnut.Rd
man/evaluate.heterogeneity.Rd
man/floating.ceiling.Rd
man/floating.floor.Rd
man/genomic.tracks.Rd
man/get.gene.name.Rd
man/get.single.base.score.bw.Rd
man/grepl.data.frame.Rd
man/incucyte.Rd
man/install.pkg.source.Rd
man/intersect.bedtools.Rd
man/intersect.regions.Rd
man/is.color.Rd
man/is.nan_df.Rd
man/mass.to.volume.Rd
man/molarity.to.mass.Rd
man/move.df.col.Rd
man/multi.bigwig.mean.Rd
man/pStars.Rd
man/pkg.check.Rd
man/pkg.version.Rd
man/plot.NES.Rd
man/plot.density.differences.Rd
man/plot.density.profile.Rd
man/plot.density.profile.smooth.Rd
man/plot.density.summary.Rd
man/plot.gsea.Rd
man/plot.multi.gsea.Rd
man/qPCR.results.Rd
man/qPCR.results.rep1.Rd
man/qPCR.results.rep2.Rd
man/qPCR.rna.exp.Rd
man/qPCR.rna.mean.reps.Rd
man/read.computeMatrix.file.Rd
man/reorder.samples.computeMatrix.Rd
man/restore_packages.Rd
man/restriction.sites.to.bed.Rd
man/sort.bed.Rd
man/store_packages.Rd
man/substract.bw.Rd
man/uniform.x.axis.Rd
man/uniform.y.axis.Rd
man/update_pkgs.Rd
man/venn.overlap.Rd
man/volcano.Rd
vignettes/Rseb.overview.vignette.Rmd
vignettes/images/Rseb_workflow.svg
