VaSP: Quantification and Visualization of Variations of Splicing in Population

Discovery of genome-wide variable alternative splicing events from short-read RNA-seq data and visualizations of gene splicing information for publication-quality multi-panel figures in a population.

Getting started

Package details

AuthorHuihui Yu [aut, cre] (<https://orcid.org/0000-0003-2725-1937>), Qian Du [aut] (<https://orcid.org/0000-0003-3864-8745>), Chi Zhang [aut] (<https://orcid.org/0000-0002-1827-8137>)
Bioconductor views AlternativeSplicing Clustering DifferentialExpression DifferentialSplicing ImmunoOncology KEGG Preprocessing RNASeq StatisticalMethod Visualization
MaintainerHuihui Yu <yuhuihui2011@foxmail.com>
LicenseGPL (>= 2.0)
Version1.2.5
URL https://github.com/yuhuihui2011/VaSP
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("VaSP")

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VaSP documentation built on Feb. 28, 2021, 2:02 a.m.