generate.boot.nonparametric: Generate and calculate bootstrap means for all clusters...
In hdng/clonevol: Clonal ordering and visualization
Description
Generate and calculate bootstrap means for all clusters
Depricated!
Usage
1
2
3
generate.boot.nonparametric(variants, cluster.col.name = "cluster",
vaf.col.names = NULL, vaf.in.percent = TRUE, num.boots = 1000,
zero.sample = NULL)
Arguments
variants:
data frame of variants with cluster assignments and VAF
of samples. Columns are c('cluster', 'sample1', 'sample2', ....)
zero.sample:
The sample of zero vaf (to use to compare with other
clusters to determine if the cluster should be considered zero VAF, and
not included in the models)
hdng/clonevol documentation built on May 17, 2019, 3:19 p.m.
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Description
Generate and calculate bootstrap means for all clusters Depricated!
Usage
1 2 3 | generate.boot.nonparametric(variants, cluster.col.name = "cluster",
vaf.col.names = NULL, vaf.in.percent = TRUE, num.boots = 1000,
zero.sample = NULL)
|
Arguments
variants: |
data frame of variants with cluster assignments and VAF of samples. Columns are c('cluster', 'sample1', 'sample2', ....) |
zero.sample: |
The sample of zero vaf (to use to compare with other clusters to determine if the cluster should be considered zero VAF, and not included in the models) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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