All R packages

Found 39458 packages. Showing results 3351 to 3400.

Bioconductor-mirror/BiocGenerics
S4 generic functions for Bioconductor
Bioconductor-mirror/biocGraph
Graph examples and use cases in Bioinformatics
Bioconductor-mirror/BiocInstaller
Install/Update Bioconductor, CRAN, and github Packages
Bioconductor-mirror/BioCor
Functional similarities
Bioconductor-mirror/BiocParallel
Bioconductor facilities for parallel evaluation
Bioconductor-mirror/BiocStyle
Standard styles for vignettes and other Bioconductor documents
Bioconductor-mirror/biocViews
Categorized views of R package repositories
Bioconductor-mirror/BiocWorkflowTools
Tools to aid the development of Bioconductor Workflow packages
Bioconductor-mirror/bioDist
Different distance measures
Bioconductor-mirror/biomaRt
Interface to BioMart databases (e.g. Ensembl, COSMIC, Wormbase and Gramene)
Bioconductor-mirror/BioMedR
Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions
Bioconductor-mirror/biomformat
An interface package for the BIOM file format
Bioconductor-mirror/BioMVCClass
Model-View-Controller (MVC) Classes That Use Biobase
Bioconductor-mirror/biomvRCNS
Copy Number study and Segmentation for multivariate biological data
Bioconductor-mirror/BioNet
Routines for the functional analysis of biological networks
Bioconductor-mirror/BioQC
Detect tissue heterogeneity in expression profiles with gene sets
Bioconductor-mirror/BioSeqClass
Classification for Biological Sequences
Bioconductor-mirror/biosigner
Signature discovery from omics data
Bioconductor-mirror/Biostrings
String objects representing biological sequences, and matching algorithms
Bioconductor-mirror/biosvd
Package for high-throughput data processing, outlier detection, noise removal and dynamic modeling
Bioconductor-mirror/biotmle
Targeted Learning for Biomarker Discovery with Moderated Statistics
Bioconductor-mirror/biovizBase
Basic graphic utilities for visualization of genomic data.
Bioconductor-mirror/BiRewire
High-performing routines for the randomization of a bipartite graph (or a binary event matrix), undirected and directed signed graph preserving degree distribution (or marginal totals)
Bioconductor-mirror/birta
Bayesian Inference of Regulation of Transcriptional Activity
Bioconductor-mirror/birte
Bayesian Inference of Regulatory Influence on Expression (biRte)
Bioconductor-mirror/BiSeq
Processing and analyzing bisulfite sequencing data
Bioconductor-mirror/BitSeq
Transcript expression inference and differential expression analysis for RNA-seq data
Bioconductor-mirror/blima
Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) level
Bioconductor-mirror/BLMA
BLMA: A package for bi-level meta-analysis
Bioconductor-mirror/BPRMeth
Model higher-order methylation profiles
Bioconductor-mirror/BRAIN
Baffling Recursive Algorithm for Isotope distributioN calculations
Bioconductor-mirror/BrainStars
query gene expression data and plots from BrainStars (B*)
Bioconductor-mirror/branchpointer
Prediction of intronic splicing branchpoints
Bioconductor-mirror/bridge
Bayesian Robust Inference for Differential Gene Expression
Bioconductor-mirror/BridgeDbR
Code for using BridgeDb identifier mapping framework from within R
Bioconductor-mirror/BrowserViz
BrowserViz: interactive R/browser graphics using websockets and JSON
Bioconductor-mirror/BrowserVizDemo
BrowserVizDemo: How to subclass BrowserViz
Bioconductor-mirror/BSgenome
Infrastructure for Biostrings-based genome data packages and support for efficient SNP representation
Bioconductor-mirror/bsseq
Analyze, manage and store bisulfite sequencing data
Bioconductor-mirror/BubbleTree
BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
Bioconductor-mirror/BufferedMatrix
A matrix data storage object held in temporary files
Bioconductor-mirror/BufferedMatrixMethods
Microarray Data related methods that utlize BufferedMatrix objects
Bioconductor-mirror/BUMHMM
Computational pipeline for computing probability of modification from structure probing experiment data
Bioconductor-mirror/bumphunter
Bump Hunter
Bioconductor-mirror/BUS
Gene network reconstruction
Bioconductor-mirror/CAFE
Chromosmal Aberrations Finder in Expression data
Bioconductor-mirror/CAGEr
Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
Bioconductor-mirror/CALIB
Calibration model for estimating absolute expression levels from microarray data
Bioconductor-mirror/canceR
A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC.
Bioconductor-mirror/cancerclass
Development and validation of diagnostic tests from high-dimensional molecular data