All R packages

Found 39546 packages. Showing results 3651 to 3700.

Bioconductor-mirror/EmpiricalBrownsMethod
Uses Brown's method to combine p-values from dependent tests
Bioconductor-mirror/ENCODExplorer
A compilation of ENCODE metadata
Bioconductor-mirror/ENmix
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
Bioconductor-mirror/EnrichedHeatmap
Making Enriched Heatmaps
Bioconductor-mirror/EnrichmentBrowser
Seamless navigation through combined results of set-based and network-based enrichment analysis
Bioconductor-mirror/ensembldb
Utilities to create and use Ensembl-based annotation databases
Bioconductor-mirror/ensemblVEP
R Interface to Ensembl Variant Effect Predictor
Bioconductor-mirror/ENVISIONQuery
Retrieval from the ENVISION bioinformatics data portal into R
Bioconductor-mirror/epigenomix
Epigenetic and gene transcription data normalization and integration with mixture models
Bioconductor-mirror/epiNEM
epiNEM
Bioconductor-mirror/epivizr
R Interface to epiviz web app
Bioconductor-mirror/epivizrData
Data Management API for epiviz interactive visualization app
Bioconductor-mirror/epivizrServer
WebSocket server infrastructure for epivizr apps and packages
Bioconductor-mirror/epivizrStandalone
Run Epiviz Interactive Genomic Data Visualization App within R
Bioconductor-mirror/erccdashboard
Assess Differential Gene Expression Experiments with ERCC Controls
Bioconductor-mirror/erma
epigenomic road map adventures
Bioconductor-mirror/esetVis
Visualizations of expressionSet Bioconductor object
Bioconductor-mirror/eudysbiome
Cartesian plot and contingency test on 16S Microbial data
Bioconductor-mirror/EventPointer
An effective identification of alternative splicing events using junction arrays and RNA-Seq data
Bioconductor-mirror/EWCE
Expression Weighted Celltype Enrichment
Bioconductor-mirror/ExiMiR
R functions for the normalization of Exiqon miRNA array data
Bioconductor-mirror/exomeCopy
Copy number variant detection from exome sequencing read depth
Bioconductor-mirror/exomePeak
exome-based anlaysis of MeRIP-Seq data: peak calling and differential analysis
Bioconductor-mirror/ExperimentHub
Client to access ExperimentHub resources
Bioconductor-mirror/ExperimentHubData
Add resources to ExperimentHub
Bioconductor-mirror/explorase
GUI for exploratory data analysis of systems biology data
Bioconductor-mirror/ExpressionAtlas
Download datasets from EMBL-EBI Expression Atlas
Bioconductor-mirror/ExpressionView
Visualize biclusters identified in gene expression data
Bioconductor-mirror/fabia
FABIA: Factor Analysis for Bicluster Acquisition
Bioconductor-mirror/facopy
Feature-based association and gene-set enrichment for copy number alteration analysis in cancer
Bioconductor-mirror/factDesign
Factorial designed microarray experiment analysis
Bioconductor-mirror/FamAgg
Pedigree Analysis and Familial Aggregation
Bioconductor-mirror/farms
FARMS - Factor Analysis for Robust Microarray Summarization
Bioconductor-mirror/fastLiquidAssociation
functions for genome-wide application of Liquid Association
Bioconductor-mirror/fastseg
fastseg - a fast segmentation algorithm
Bioconductor-mirror/fCCAC
functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets
Bioconductor-mirror/fCI
f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics
Bioconductor-mirror/fdrame
FDR adjustments of Microarray Experiments (FDR-AME)
Bioconductor-mirror/FEM
Identification of Functional Epigenetic Modules
Bioconductor-mirror/ffpe
Quality assessment and control for FFPE microarray expression data
Bioconductor-mirror/FGNet
Functional Gene Networks derived from biological enrichment analyses
Bioconductor-mirror/fgsea
Fast Gene Set Enrichment Analysis
Bioconductor-mirror/FindMyFriends
Microbial Comparative Genomics in R
Bioconductor-mirror/FISHalyseR
FISHalyseR a package for automated FISH quantification
Bioconductor-mirror/FitHiC
Confidence estimation for intra-chromosomal contact maps
Bioconductor-mirror/flagme
Analysis of Metabolomics GC/MS Data
Bioconductor-mirror/flipflop
Fast lasso-based isoform prediction as a flow problem
Bioconductor-mirror/flowAI
Automatic and interactive quality control for flow cytometry data
Bioconductor-mirror/flowBeads
flowBeads: Analysis of flow bead data
Bioconductor-mirror/flowBin
Combining multitube flow cytometry data by binning