All R packages

Found 39503 packages. Showing results 4151 to 4200.

Bioconductor-mirror/NormqPCR
Functions for normalisation of RT-qPCR data
Bioconductor-mirror/normr
Normalization and difference calling in ChIP-seq data
Bioconductor-mirror/npGSEA
Permutation approximation methods for gene set enrichment analysis (non-permutation GSEA)
Bioconductor-mirror/NTW
Predict gene network using an Ordinary Differential Equation (ODE) based method
Bioconductor-mirror/nucleoSim
Generate synthetic nucleosome maps
Bioconductor-mirror/nucleR
Nucleosome positioning package for R
Bioconductor-mirror/nudge
Normal Uniform Differential Gene Expression detection
Bioconductor-mirror/NuPoP
An R package for nucleosome positioning prediction
Bioconductor-mirror/occugene
Functions for Multinomial Occupancy Distribution
Bioconductor-mirror/OCplus
Operating characteristics plus sample size and local fdr for microarray experiments
Bioconductor-mirror/odseq
Outlier detection in multiple sequence alignments
Bioconductor-mirror/OGSA
Outlier Gene Set Analysis
Bioconductor-mirror/oligo
Preprocessing tools for oligonucleotide arrays
Bioconductor-mirror/oligoClasses
Classes for high-throughput arrays supported by oligo and crlmm
Bioconductor-mirror/OLIN
Optimized local intensity-dependent normalisation of two-color microarrays
Bioconductor-mirror/OLINgui
Graphical user interface for OLIN
Bioconductor-mirror/omicade4
Multiple co-inertia analysis of omics datasets
Bioconductor-mirror/OmicCircos
High-quality circular visualization of omics data
Bioconductor-mirror/OmicsMarkeR
Classification and Feature Selection for 'Omics' Datasets
Bioconductor-mirror/OncoScore
A tool to identify potentially oncogenic genes
Bioconductor-mirror/OncoSimulR
Forward Genetic Simulation of Cancer Progression with Epistasis
Bioconductor-mirror/oneChannelGUI
A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops
Bioconductor-mirror/ontoCAT
Ontology traversal and search
Bioconductor-mirror/openCyto
Hierarchical Gating Pipeline for flow cytometry data
Bioconductor-mirror/OperaMate
An R package of Data Importing, Processing and Analysis for Opera High Content Screening System
Bioconductor-mirror/oposSOM
Comprehensive analysis of transciptome data
Bioconductor-mirror/oppar
Outlier profile and pathway analysis in R
Bioconductor-mirror/OrderedList
Similarities of Ordered Gene Lists
Bioconductor-mirror/OrganismDbi
Software to enable the smooth interfacing of different database packages
Bioconductor-mirror/Organism.dplyr
dplyr-based Access to Bioconductor Annotation Resources
Bioconductor-mirror/OSAT
OSAT: Optimal Sample Assignment Tool
Bioconductor-mirror/Oscope
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq
Bioconductor-mirror/OTUbase
Provides structure and functions for the analysis of OTU data
Bioconductor-mirror/OutlierD
Outlier detection using quantile regression on the M-A scatterplots of high-throughput data
Bioconductor-mirror/PAA
PAA (Protein Array Analyzer)
Bioconductor-mirror/PADOG
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)
Bioconductor-mirror/paircompviz
Multiple comparison test visualization
Bioconductor-mirror/pandaR
PANDA Algorithm
Bioconductor-mirror/PAnnBuilder
Protein annotation data package builder
Bioconductor-mirror/panp
Presence-Absence Calls from Negative Strand Matching Probesets
Bioconductor-mirror/PANR
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations
Bioconductor-mirror/PanVizGenerator
Generate PanViz visualisations from your pangenome
Bioconductor-mirror/PAPi
Predict metabolic pathway activity based on metabolomics data
Bioconductor-mirror/parglms
support for parallelized estimation of GLMs/GEEs
Bioconductor-mirror/parody
Parametric And Resistant Outlier DYtection
Bioconductor-mirror/Path2PPI
Prediction of pathway-related protein-protein interaction networks
Bioconductor-mirror/pathifier
Quantify deregulation of pathways in cancer
Bioconductor-mirror/PathNet
An R package for pathway analysis using topological information
Bioconductor-mirror/PathoStat
PathoStat Statistical Microbiome Analysis Package
Bioconductor-mirror/pathprint
Pathway fingerprinting for analysis of gene expression arrays