All R packages

Found 39623 packages. Showing results 4551 to 4600.

Bioconductor-mirror/StarBioTrek
StarBioTrek
Bioconductor-mirror/Starr
Simple tiling array analysis of Affymetrix ChIP-chip data
Bioconductor-mirror/StarTrek
StarTrek
Bioconductor-mirror/STATegRa
Classes and methods for multi-omics data integration
Bioconductor-mirror/statTarget
Statistical Analysis of Metabolite Profile
Bioconductor-mirror/stepNorm
Stepwise normalization functions for cDNA microarrays
Bioconductor-mirror/stepwiseCM
Stepwise Classification of Cancer Samples using High-dimensional Data Sets
Bioconductor-mirror/Streamer
Enabling stream processing of large files
Bioconductor-mirror/STRINGdb
STRINGdb (Search Tool for the Retrieval of Interacting proteins database)
Bioconductor-mirror/STROMA4
Assign Properties to TNBC Patients
Bioconductor-mirror/subSeq
Subsampling of high-throughput sequencing count data
Bioconductor-mirror/SummarizedExperiment
SummarizedExperiment container
Bioconductor-mirror/supraHex
supraHex: a supra-hexagonal map for analysing tabular omics data
Bioconductor-mirror/survcomp
Performance Assessment and Comparison for Survival Analysis
Bioconductor-mirror/Sushi
Tools for visualizing genomics data
Bioconductor-mirror/sva
Surrogate Variable Analysis
Bioconductor-mirror/SVAPLSseq
SVAPLSseq-An R package to estimate the hidden factors of unwanted variability and adjust for them to enable a more powerful and accurate differential expression analysis based on RNAseq data
Bioconductor-mirror/SVM2CRM
SVM2CRM: support vector machine for cis-regulatory elements detections
Bioconductor-mirror/SWATH2stats
Transform and Filter SWATH Data for Statistical Packages
Bioconductor-mirror/SwathXtend
SWATH extended library generation and satistical data analysis
Bioconductor-mirror/swfdr
Science-wise false discovery rate and proportion of true null hypotheses estimation
Bioconductor-mirror/SwimR
SwimR: A Suite of Analytical Tools for Quantification of C. elegans Swimming Behavior
Bioconductor-mirror/switchBox
Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm
Bioconductor-mirror/switchde
Switch-like differential expression across single-cell trajectories
Bioconductor-mirror/synapter
Label-free data analysis pipeline for optimal identification and quantitation
Bioconductor-mirror/synergyfinder
Calculate and Visualize Synergy Scores for Drug Combinations
Bioconductor-mirror/synlet
Hits Selection for Synthetic Lethal RNAi Screen Data
Bioconductor-mirror/systemPipeR
systemPipeR: NGS workflow and report generation environment
Bioconductor-mirror/TargetScore
TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information
Bioconductor-mirror/TargetSearch
A package for the analysis of GC-MS metabolite profiling data
Bioconductor-mirror/TarSeqQC
TARgeted SEQuencing Experiment Quality Control
Bioconductor-mirror/TCC
TCC: Differential expression analysis for tag count data with robust normalization strategies
Bioconductor-mirror/TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Bioconductor-mirror/TCGAbiolinksGUI
"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"
Bioconductor-mirror/TCseq
Time course sequencing data analysis
Bioconductor-mirror/TDARACNE
Network reverse engineering from time course data.
Bioconductor-mirror/TEQC
Quality control for target capture experiments
Bioconductor-mirror/ternarynet
Ternary Network Estimation
Bioconductor-mirror/TFBSTools
Software Package for Transcription Factor Binding Site (TFBS) Analysis
Bioconductor-mirror/tigre
Transcription factor Inference through Gaussian process Reconstruction of Expression
Bioconductor-mirror/tilingArray
Transcript mapping with high-density oligonucleotide tiling arrays
Bioconductor-mirror/timecourse
Statistical Analysis for Developmental Microarray Time Course Data
Bioconductor-mirror/TimerQuant
Timer Quantification
Bioconductor-mirror/TIN
Transcriptome instability analysis
Bioconductor-mirror/TitanCNA
Subclonal copy number and LOH prediction from whole genome sequencing of tumours
Bioconductor-mirror/tkWidgets
R based tk widgets
Bioconductor-mirror/tofsims
Import, process and analysis of Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) imaging data
Bioconductor-mirror/ToPASeq
Package for Topology-based Pathway Analysis of RNASeq data
Bioconductor-mirror/topGO
Enrichment Analysis for Gene Ontology
Bioconductor-mirror/TPP
Analyze thermal proteome profiling (TPP) experiments