Man pages for CoverageView
Coverage visualization package for R
| CoverageBamFile-class | Class '"CoverageBamFile"' |
| CoverageBigWigFile-class | Class '"CoverageBigWigFile"' |
| CoverageView-internal | Internal Methods |
| CoverageView-package | Coverage visualization package for R |
| cov.interval | arithmetic operation on an interval |
| cov.matrix | Compute a coverage matrix |
| DF_H3K36me3 | Example of a coverage matrix using the ChIP-seq data for the... |
| DF_H3K36me3_control | Example of a coverage matrix using the control replicate for... |
| DF_H3K4me3 | Example of a coverage matrix using the ChIP-seq data for the... |
| DF_H3K4me3_ctl | Example of a coverage matrix using the control replicate for... |
| DF_H3K4me3_nopeaks_ratios | Example of a matrix with the ratio of the coverages using the... |
| draw.heatmap | Draw a coverage heatmap |
| draw.profile | Draw a coverage profile |
| export.wig | Generates a WIG file containing the coverage values for a... |
| FoxA1_chr19 | Example of a coverage matrix using the ChIP-seq data for the... |
| genome.covplot.cumdepth | Generates a cumulative genome coverage plot |
| genome.covplot.depth | Generates a genome coverage plot |
| write.profile | Write coverage values into a file |
