API for HelloRanges
Introduce *Ranges to bedtools users
| Global functions | |
|---|---|
| .R | Source code |
| .R_bedtools_disjoin | Source code |
| .aggregateCall | Source code |
| .findOverlaps | Source code |
| .test | Source code |
| GenomeFile | Source code |
| NAGRanges | Source code |
| R | Source code |
| R_bedtools_closest | Man page Source code |
| R_bedtools_complement | Man page Source code |
| R_bedtools_coverage | Man page Source code |
| R_bedtools_flank | Man page Source code |
| R_bedtools_genomecov | Man page Source code |
| R_bedtools_getfasta | Man page Source code |
| R_bedtools_groupby | Man page Source code |
| R_bedtools_intersect | Man page Source code |
| R_bedtools_jaccard | Man page Source code |
| R_bedtools_makewindows | Man page Source code |
| R_bedtools_map | Man page Source code |
| R_bedtools_merge | Man page Source code |
| R_bedtools_multiinter | Man page Source code |
| R_bedtools_nuc | Man page Source code |
| R_bedtools_shift | Man page Source code |
| R_bedtools_slop | Man page Source code |
| R_bedtools_subtract | Man page Source code |
| R_bedtools_unionbedg | Man page Source code |
| argparsing | Man page |
| bedtools_closest | Man page Source code |
| bedtools_complement | Man page Source code |
| bedtools_coverage | Man page Source code |
| bedtools_flank | Man page Source code |
| bedtools_genomecov | Man page Source code |
| bedtools_getfasta | Man page Source code |
| bedtools_groupby | Man page Source code |
| bedtools_intersect | Man page Source code |
| bedtools_jaccard | Man page Source code |
| bedtools_makewindows | Man page Source code |
| bedtools_map | Man page Source code |
| bedtools_merge | Man page Source code |
| bedtools_multiinter | Man page Source code |
| bedtools_nuc | Man page Source code |
| bedtools_shift | Man page Source code |
| bedtools_slop | Man page Source code |
| bedtools_subtract | Man page Source code |
| bedtools_unionbedg | Man page Source code |
| coerceOpts | Source code |
| distmode | Man page |
| distmode,CompressedAtomicList-method | Man page |
| distmode,SimpleList-method | Man page |
| distmode,factor-method | Man page |
| distmode,vector-method | Man page |
| do_R_call | Source code |
| do_bedtools_closest | Man page |
| do_bedtools_complement | Man page |
| do_bedtools_coverage | Man page |
| do_bedtools_flank | Man page |
| do_bedtools_genomecov | Man page |
| do_bedtools_getfasta | Man page |
| do_bedtools_groupby | Man page |
| do_bedtools_intersect | Man page |
| do_bedtools_jaccard | Man page |
| do_bedtools_makewindows | Man page |
| do_bedtools_map | Man page |
| do_bedtools_merge | Man page |
| do_bedtools_multiinter | Man page |
| do_bedtools_nuc | Man page |
| do_bedtools_shift | Man page |
| do_bedtools_slop | Man page |
| do_bedtools_subtract | Man page |
| do_bedtools_unionbedg | Man page |
| getFormat | Source code |
| getR | Source code |
| hasFormat | Source code |
| hasRanges | Source code |
| importA | Source code |
| importB | Source code |
| importExtraColsArgs | Source code |
| importGenome | Source code |
| intersectPairs | Source code |
| isBam | Source code |
| isBed | Source code |
| isGenome | Source code |
| isResource | Source code |
| isVcf | Source code |
| makeNAColumn | Source code |
| make_do | Source code |
| normA | Source code |
| normB | Source code |
| normCandO | Source code |
| normG | Source code |
| objectName | Source code |
| overlapWidth | Source code |
| pair | Man page |
| pair,GAlignments,GenomicRanges-method | Man page |
| pair,GenomicRanges,GenomicRanges-method | Man page |
| pair,SummarizedExperiment,GenomicRanges-method | Man page |
| pair,Vector,Vector-method | Man page |
| pipeFile | Source code |
| prepAnsRanges | Source code |
| prepOverlapRanges | Source code |
| preprocessCmd | Source code |
| pushR | Source code |
| restrictByFraction | Source code |
| stdinFile | Source code |
| substituteArgs | Source code |
| toparent | Source code |
