API for IHW
Independent Hypothesis Weighting
| Global functions | |
|---|---|
| CBUM | Source code |
| adj_pvalues | Man page |
| adj_pvalues,ihwResult-method | Man page |
| adj_pvalues_ihwResult | Source code |
| adjustment_type_ihwResult | Source code |
| alpha | Man page |
| alpha,ihwResult-method | Man page |
| alpha_ihwResult | Source code |
| as.data.frame,ihwResult-method | Man page |
| as.data.frame_ihwResult | Man page Source code |
| covariate_type | Man page |
| covariate_type,ihwResult-method | Man page |
| covariate_type_ihwResult | Source code |
| covariates | Man page |
| covariates,ihwResult-method | Man page |
| covariates_ihwResult | Source code |
| filter_pvals_for_optim | Source code |
| get_bh_threshold | Man page Source code |
| get_bh_thresholds | Source code |
| get_wbh_weights | Source code |
| groups_by_filter | Man page Source code |
| groups_factor | Man page |
| groups_factor,ihwResult-method | Man page |
| groups_factor_ihwResult | Source code |
| ihw | Man page Source code |
| ihw.DESeqResults | Man page Source code |
| ihw.default | Man page Source code |
| ihw.formula | Man page Source code |
| ihwResult | Man page |
| ihwResult-class | Man page |
| ihw_convex | Source code |
| ihw_internal | Source code |
| ihw_milp | Source code |
| lsl_pi0_est | Source code |
| m_groups | Man page |
| m_groups,ihwResult-method | Man page |
| m_groups_ihwResult | Source code |
| mydiv | Source code |
| nbins | Man page |
| nbins,ihwResult-method | Man page |
| nbins_ihwResult | Source code |
| nfolds | Man page |
| nfolds,ihwResult-method | Man page |
| nfolds_ihwResult | Source code |
| normalize_weights | Source code |
| nrow,ihwResult-method | Man page |
| padj_to_threshold | Source code |
| per_bin_fdrs | Source code |
| plot,ihwResult,ANY-method | Man page |
| plot,ihwResult-method | Man page |
| plot_decisionboundary | Source code |
| plot_weights | Source code |
| plugin_fdr.ihwResult | Source code |
| presorted_grenander | Source code |
| pvalues | Man page |
| pvalues,ihwResult-method | Man page |
| pvalues_ihwResult | Source code |
| rand_cbum | Source code |
| regularization_term | Man page |
| regularization_term,ihwResult-method | Man page |
| regularization_term_ihwResult | Source code |
| regularize_weights | Source code |
| rejected_hypotheses | Man page |
| rejected_hypotheses,ihwResult-method | Man page |
| rejected_hypotheses_ihwResult | Source code |
| rejections | Man page |
| rejections,ihwResult-method | Man page |
| rejections_ihwResult | Source code |
| show,ihwResult-method | Man page |
| stratification_breaks.ihwResult | Source code |
| stratum_sizes | Source code |
| thresholds | Man page |
| thresholds,ihwResult-method | Man page |
| thresholds_ihwResult | Source code |
| thresholds_to_weights | Source code |
| thresholds_to_weights_full | Source code |
| total_variation | Source code |
| uniform_deviation | Source code |
| weighted_pvalues | Man page |
| weighted_pvalues,ihwResult-method | Man page |
| weighted_pvalues_ihwResult | Source code |
| weighted_storey_pi0 | Source code |
| weights,ihwResult-method | Man page |
| weights_ihwResult | Source code |
