API for SCAN.UPC
Single-channel array normalization (SCAN) and Universal exPression Codes (UPC)
| Global functions | |
|---|---|
| BatchAdjust | Man page Source code |
| BatchAdjustFromFile | Man page Source code |
| EM_vMix | Source code |
| InstallBrainArrayPackage | Man page Source code |
| ParseMetaFromGtfFile | Man page Source code |
| ProcessGtfSubset | Source code |
| RS_BC | Source code |
| SCAN | Man page Source code |
| SCAN_TwoColor | Man page Source code |
| SCANfast | Man page Source code |
| SCANprivate | Source code |
| UPC | Man page Source code |
| UPC_Generic | Man page Source code |
| UPC_Generic_ExpressionSet | Man page Source code |
| UPC_RNASeq | Man page Source code |
| UPC_RNASeq_Single | Man page Source code |
| UPC_TwoColor | Man page Source code |
| UPC_ln | Source code |
| UPC_nb | Source code |
| UPC_nn | Source code |
| UPC_nn_bayes | Source code |
| UPCfast | Man page Source code |
| UPCprivate | Source code |
| assign_bin | Source code |
| buildDesignMatrix | Source code |
| createOutputDir | Source code |
| dn | Source code |
| downloadBeadChipFromGEO | Source code |
| downloadFromGEO | Source code |
| getAnnotationData | Source code |
| getDataForHtaArray | Source code |
| getDataForMostArrayTypes | Source code |
| getSampleIndices | Source code |
| mlln | Source code |
| mybeta | Source code |
| processCelFile | Source code |
| processCelFiles | Source code |
| processTwoColor | Source code |
| readFilesIntoMatrix | Source code |
| shouldDownloadFromGEO | Source code |
| sig | Source code |
| vbeta | Source code |
| vresp | Source code |
| vsig | Source code |
